RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 IMMP2LQ96T52 175 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 SHANK2-AS3Q9BTD1 123 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 YTHDF2Q9Y5A9 579 aaKnown RBP4.22□□□□□ -1.73
COL17A1-206ENST00000483876 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.73
COL17A1-206ENST00000483876 TRAV5A0A0B4J249 113 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 LINC01548A6NM66 108 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 H3BUX3 64 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 AP4M1O00189 453 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 NUPL2O15504 423 aaKnown RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 TGOLN2O43493 480 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 CLEC3BP05452 202 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 PPIFP30405 207 aaKnown RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 ATP5G3P48201 142 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 CEBPGP53567 150 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 UBE2G2P60604 165 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 RPL23P62829 140 aaKnown RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 SUMO1P63165 101 aaKnown RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 UBE2L3P68036 154 aaKnown RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 RHOGP84095 191 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 ATP5G2Q06055 141 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 C15orf32Q32M92 178 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 Q6YL49 198 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 C19orf35Q6ZS72 473 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 LINC01551Q86U37 167 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 BPIFA4PQ86YQ2 179 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 CBLN2Q8IUK8 224 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 MRAPQ8TCY5 172 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 C2CD4CQ8TF44 421 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF418Q8TF45 676 aaPredicted RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 EEF1AKMT3Q96AZ1 226 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 RNF125Q96EQ8 232 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 SMIM12Q96EX1 92 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 YPEL4Q96NS1 127 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 SLC25A39Q9BZJ4 359 aaPredicted RBP4.21□□□□□ -1.74
COL17A1-206ENST00000483876 KLF12Q9Y4X4 402 aa4.21□□□□□ -1.74
COL17A1-206ENST00000483876 TRBV24-1A0A075B6N3 115 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 IGHV3OR16-10A0A075B7F0 116 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 IGHV3-21A0A0B4J1V1 117 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 A0A0G2JLM5 398 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 TRBV6-1A0A0K0K1D8 114 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 G3V318 75 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 H3BRN7 92 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF253O75346 499 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 EIF3GO75821 320 aaKnown RBP eCLIP4.2□□□□□ -1.74
COL17A1-206ENST00000483876 OR2J3O76001 311 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 IGLV1-40P01703 118 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 PRB2P02812 416 aaPredicted RBP4.2□□□□□ -1.74
COL17A1-206ENST00000483876 IL4P05112 153 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 OR10J4P0C629 311 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 GP9P14770 177 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 RAB5AP20339 215 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 ADMP35318 185 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
COL17A1-206ENST00000483876 PDE6HQ13956 83 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF674Q2M3X9 581 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 DEFB112Q30KQ8 113 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 Q56UQ5 140 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 C1orf194Q5T5A4 169 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 MORN5Q5VZ52 161 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF600Q6ZNG1 722 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 REC114Q7Z4M0 266 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 TMEM86BQ8N661 226 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 OCC1Q8TAD7 63 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 GPR82Q96P67 336 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 PYGO2Q9BRQ0 406 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 C20orf24Q9BUV8 137 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 OTORQ9NRC9 128 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 EPDR1Q9UM22 224 aa4.2□□□□□ -1.74
COL17A1-206ENST00000483876 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 TRBV19A0A075B6N1 114 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 TRAV9-1A0A075B6T8 112 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 SCO2A0A1W2PP80 73 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 PGPA6NDG6 321 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 FBLL1A6NHQ2 334 aaKnown RBP4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF98A6NK75 572 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 GGTLC3B5MD39 225 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 H7BYZ3 331 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 BMPR1BO00238 502 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ISLRO14498 428 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
COL17A1-206ENST00000483876 GCGP01275 180 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 CRYBA1P05813 215 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
COL17A1-206ENST00000483876 IGLC2P0DOY2 106 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 PYYP10082 97 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 RPL7P18124 248 aaKnown RBP4.19□□□□□ -1.74
COL17A1-206ENST00000483876 CRYBB3P26998 211 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 RPL35P42766 123 aaKnown RBP4.19□□□□□ -1.74
COL17A1-206ENST00000483876 MEOX2P50222 304 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 HILS1P60008 231 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 LYZP61626 148 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 BLCAPP62952 87 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 CFHR3Q02985 330 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ELOBQ15370 118 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ADIRFQ15847 76 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ECSCRQ19T08 205 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 TMEM183BQ1AE95 376 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 ZNF329Q86UD4 541 aa4.19□□□□□ -1.74
COL17A1-206ENST00000483876 TMEM219Q86XT9 240 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms