RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.23□□□□□ -0.13
HPS4-213ENST00000483631 C17orf77Q96MU5 243 aa14.23□□□□□ -0.13
HPS4-213ENST00000483631 RNF24Q9Y225 148 aa14.23□□□□□ -0.13
HPS4-213ENST00000483631 H3BRN7 92 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 K7EPK0 472 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 SSSCA1O60232 199 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 TSC22D2O75157 780 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 RPL7P18124 248 aaKnown RBP14.22□□□□□ -0.13
HPS4-213ENST00000483631 MITD1Q8WV92 249 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 FAM210BQ96KR6 192 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 SHANK2-AS3Q9BTD1 123 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 SLC25A39Q9BZJ4 359 aaPredicted RBP14.22□□□□□ -0.13
HPS4-213ENST00000483631 SLC35B3Q9H1N7 401 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 NPVFQ9HCQ7 196 aa14.22□□□□□ -0.13
HPS4-213ENST00000483631 SMCO3A2RU48 225 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 F6UB75 175 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 HYPMO75409 117 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 DUSP14O95147 198 aaKnown RBP14.21□□□□□ -0.13
HPS4-213ENST00000483631 IL7P13232 177 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 ANXA7P20073 488 aaKnown RBP14.21□□□□□ -0.13
HPS4-213ENST00000483631 FXYD7P58549 80 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 OXA1LQ15070 435 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 IAH1Q2TAA2 248 aaPredicted RBP14.21□□□□□ -0.13
HPS4-213ENST00000483631 C20orf173Q96LM9 149 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 HIGD1AQ9Y241 93 aa14.21□□□□□ -0.13
HPS4-213ENST00000483631 HBE1P02100 147 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 PXDC1Q5TGL8 231 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 AMTNQ6UX39 209 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 OR10P1Q8NGE3 313 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 NDUFAF3Q9BU61 184 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 GGACTQ9BVM4 153 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 NDUFA13Q9P0J0 144 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 DKK2Q9UBU2 259 aa14.2□□□□□ -0.14
HPS4-213ENST00000483631 IGHV3OR16-12A0A075B7B8 117 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 LINC00869P0C866 280 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 P0DMU3 169 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 FAM231AP0DMU4 169 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 FAM231CP0DMU5 169 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 TEPPQ6URK8 271 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 C1orf158Q8N1D5 194 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 ZBTB8BQ8NAP8 495 aaPredicted RBP14.19□□□□□ -0.14
HPS4-213ENST00000483631 IGF2BP2-AS1Q96M15 143 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 SCRT1Q9BWW7 348 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 MGAT4CQ9UBM8 478 aa14.19□□□□□ -0.14
HPS4-213ENST00000483631 A0A087X0K7 114 aa14.18□□□□□ -0.14
HPS4-213ENST00000483631 LINC00854A0A1B0GVQ3 168 aa14.18□□□□□ -0.14
HPS4-213ENST00000483631 METTL15P1P0C7V9 234 aa14.18□□□□□ -0.14
HPS4-213ENST00000483631 B2MP61769 119 aa14.18□□□□□ -0.14
HPS4-213ENST00000483631 ZNF767PQ75MW2 155 aa14.18□□□□□ -0.14
HPS4-213ENST00000483631 RCL1Q9Y2P8 373 aaKnown RBP14.18□□□□□ -0.14
HPS4-213ENST00000483631 TRAV8-2A0A0B4J237 113 aa14.17□□□□□ -0.14
HPS4-213ENST00000483631 RRN3P1Q2M238 152 aa14.17□□□□□ -0.14
HPS4-213ENST00000483631 NIPSNAP3BQ9BS92 247 aa14.17□□□□□ -0.14
HPS4-213ENST00000483631 C20orf85Q9H1P6 137 aa14.17□□□□□ -0.14
HPS4-213ENST00000483631 CCNKO75909 580 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 SCGB1D2O95969 90 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 OR5G3P0C626 314 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 CNN1P51911 297 aaKnown RBP14.16□□□□□ -0.14
HPS4-213ENST00000483631 EMP1P54849 157 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 RRAS2P62070 204 aaPredicted RBP14.16□□□□□ -0.14
HPS4-213ENST00000483631 FAM222AQ5U5X8 452 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 ZNF546Q86UE3 836 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 POM121L12Q8N7R1 296 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 OR11H7Q8NGC8 314 aa14.16□□□□□ -0.14
HPS4-213ENST00000483631 LOC102723971A0A1B0GUV8 181 aa14.15□□□□□ -0.14
HPS4-213ENST00000483631 PLA2G10O15496 165 aa14.15□□□□□ -0.14
HPS4-213ENST00000483631 LYRM1O43325 122 aa14.15□□□□□ -0.14
HPS4-213ENST00000483631 CXCL2P19875 107 aa14.15□□□□□ -0.14
HPS4-213ENST00000483631 ARV1Q9H2C2 271 aa14.15□□□□□ -0.14
HPS4-213ENST00000483631 GSKIPQ9P0R6 139 aa14.15□□□□□ -0.14
HPS4-213ENST00000483631 C7orf66A4D0T2 115 aa14.14□□□□□ -0.15
HPS4-213ENST00000483631 INSP01308 110 aa14.14□□□□□ -0.15
HPS4-213ENST00000483631 MBPP02686 304 aaPredicted RBP14.14□□□□□ -0.15
HPS4-213ENST00000483631 FGL1Q08830 312 aa14.14□□□□□ -0.15
HPS4-213ENST00000483631 GSG1LQ6UXU4 331 aa14.14□□□□□ -0.15
HPS4-213ENST00000483631 TMEM208Q9BTX3 173 aa14.14□□□□□ -0.15
HPS4-213ENST00000483631 ARL6Q9H0F7 186 aa14.14□□□□□ -0.15
HPS4-213ENST00000483631 YTHDF2Q9Y5A9 579 aaKnown RBP14.14□□□□□ -0.15
HPS4-213ENST00000483631 GOSR2O14653 212 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 CRXO43186 299 aaPredicted RBP14.13□□□□□ -0.15
HPS4-213ENST00000483631 TCRBP04435 133 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 CXCL3P19876 107 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 TSPOP30536 169 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 ZNF846Q147U1 533 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 PATE2Q6UY27 113 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 LINC00336Q6ZUF6 198 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 RNF182Q8N6D2 247 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 ZNF738Q8NE65 137 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 UHRF2Q96PU4 802 aa14.13□□□□□ -0.15
HPS4-213ENST00000483631 MRPS12O15235 138 aaKnown RBP14.12□□□□□ -0.15
HPS4-213ENST00000483631 SLC38A11Q08AI6 406 aa14.12□□□□□ -0.15
HPS4-213ENST00000483631 PSG3Q16557 428 aa14.12□□□□□ -0.15
HPS4-213ENST00000483631 LINC00299Q6ZSB3 139 aa14.12□□□□□ -0.15
HPS4-213ENST00000483631 CCDC32Q9BV29 185 aa14.12□□□□□ -0.15
HPS4-213ENST00000483631 LYRM9A8MSI8 78 aa14.11□□□□□ -0.15
HPS4-213ENST00000483631 BOLA2-SMG1P6H3BVE0 249 aa14.11□□□□□ -0.15
HPS4-213ENST00000483631 L7N2F9 121 aa14.11□□□□□ -0.15
HPS4-213ENST00000483631 AGPAT2O15120 278 aa14.11□□□□□ -0.15
HPS4-213ENST00000483631 VAMP2P63027 116 aa14.11□□□□□ -0.15
HPS4-213ENST00000483631 ARL16Q0P5N6 197 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms