RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 FAM71E2Q8N5Q1 922 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 Q8N6K4 173 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 OR51S1Q8NGJ8 323 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 C4orf3Q8WVX3 66 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 RGP1Q92546 391 aaPredicted RBP4.81□□□□□ -1.64
CLK1-212ENST00000482590 CMSS1Q9BQ75 279 aaKnown RBP4.81□□□□□ -1.64
CLK1-212ENST00000482590 KRTAP4-4Q9BYR3 166 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 SLC25A39Q9BZJ4 359 aaPredicted RBP4.81□□□□□ -1.64
CLK1-212ENST00000482590 SLIRPQ9GZT3 109 aaKnown RBP4.81□□□□□ -1.64
CLK1-212ENST00000482590 OR51E2Q9H255 320 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 GNB4Q9HAV0 340 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 TMEM138Q9NPI0 162 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 PARP11Q9NR21 331 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 DOK5Q9P104 306 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 MTFP1Q9UDX5 166 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 TRAPPC2LQ9UL33 140 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 CARHSP1Q9Y2V2 147 aaKnown RBP4.81□□□□□ -1.64
CLK1-212ENST00000482590 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
CLK1-212ENST00000482590 IGHV1OR15-1A0A075B7D0 117 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 A0A087WW49 117 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 MCRIP1C9JLW8 97 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 H0Y9J4 135 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 SLC31A2O15432 143 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 INSL3P51460 131 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
CLK1-212ENST00000482590 CACNG7P62955 275 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 HBG1P69891 147 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 HBG2P69892 147 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 ZNF45Q02386 682 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 ZNF616Q08AN1 781 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 C1orf100Q5SVJ3 147 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 ZFP1Q6P2D0 407 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 RPL22L1Q6P5R6 122 aaKnown RBP4.8□□□□□ -1.64
CLK1-212ENST00000482590 ZNF497Q6ZNH5 498 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 C11orf72Q8NBR9 251 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 OR10G9Q8NGN4 311 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 OR4K15Q8NH41 348 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 CYGBQ8WWM9 190 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 ZNF184Q99676 751 aaPredicted RBP4.8□□□□□ -1.64
CLK1-212ENST00000482590 HSPB9Q9BQS6 159 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 CKLFQ9UBR5 152 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 LYSTQ99698 3801 aa4.8□□□□□ -1.64
CLK1-212ENST00000482590 TNCP24821 2201 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 RBFOX3A6NFN3 312 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 ZNF736B4DX44 427 aaPredicted RBP4.79□□□□□ -1.64
CLK1-212ENST00000482590 PRAC2D3DTV9 90 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 OVOL1O14753 267 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 HLA-DRB1P01911 266 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 PSMB8P28062 276 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 RCVRNP35243 200 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 ZNF137PP52743 207 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 TCTAP57738 103 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 SELENOTP62341 195 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 ACOT6Q3I5F7 207 aaPredicted RBP4.79□□□□□ -1.64
CLK1-212ENST00000482590 FAM162BQ5T6X4 162 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 XAF1Q6GPH4 301 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 ZNF429Q86V71 674 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 ZNF439Q8NDP4 499 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 OR1N2Q8NGR9 330 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 METTL26Q96S19 204 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 TSC22D3Q99576 134 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 ZNF581Q9P0T4 197 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 JPT1Q9UK76 154 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 NUBP2Q9Y5Y2 271 aa4.79□□□□□ -1.64
CLK1-212ENST00000482590 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 TRAV9-2A0A087WT02 112 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 TRAV41A0A0B4J266 112 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 LOC100130705A0A1B0GUX0 176 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 A0A1B0GXF2 115 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 I3L521 148 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 ATG12O94817 140 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 HBZP02008 142 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 OR5G3P0C626 314 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 ESDP10768 282 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 BTCP35070 178 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 CTRLP40313 264 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 LGALS7P47929 136 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 GNB1P62873 340 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 CDK10Q15131 360 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 PLGLAQ15195 96 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 Q499Y3 187 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 FAM53AQ6NSI3 398 aaPredicted RBP4.78□□□□□ -1.64
CLK1-212ENST00000482590 GLIPR1L1Q6UWM5 242 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 TEX43Q6ZNM6 134 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 ZNF485Q8NCK3 441 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 ZNF555Q8NEP9 628 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 OR1L1Q8NH94 360 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 RHOXF1Q8NHV9 184 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 MYOZ3Q8TDC0 251 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 MRPS24Q96EL2 167 aaKnown RBP4.78□□□□□ -1.64
CLK1-212ENST00000482590 GALNT14Q96FL9 552 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 CST11Q9H112 138 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 TAF9BQ9HBM6 251 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 ENY2Q9NPA8 101 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 PLSCR3Q9NRY6 295 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 HSPB11Q9Y547 144 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms