RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 Q56UQ5 140 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 CIARTQ8N365 385 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-218ENST00000482056 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 LPAR2Q9HBW0 351 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 ZFHX2Q9C0A1 2572 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-218ENST00000482056 LOC102724200A0A096LPH7 203 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-218ENST00000482056 TRAV8-1A0A0A6YYK1 113 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 DLEU1O43261 78 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 IGLV2-11P01706 119 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 HLA-DRB1P01911 266 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 LCN12Q6JVE5 192 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 NPBQ8NG41 125 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 TMEM208Q9BTX3 173 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 APC2O95996 2303 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
C9orf3-218ENST00000482056 C2orf70A6NJV1 201 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 A6NNC1 897 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 M0R1W7 72 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 TOX4O94842 621 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-218ENST00000482056 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 ATOH7Q8N100 152 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 LAMTOR2Q9Y2Q5 125 aa12.15□□□□□ -0.46
C9orf3-218ENST00000482056 A0A1B0GW15 77 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 NDUFA3O95167 84 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 IL4P05112 153 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 RIGQ13278 110 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 HILPDAQ9Y5L2 63 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 GNG7O60262 68 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 OR5AL1P0C617 328 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 LINC00614P0C842 121 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 ARF6P62330 175 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 Q6AWC8 147 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 ZNF491Q8N8L2 437 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 C1RLQ9NZP8 487 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
C9orf3-218ENST00000482056 GOLT1BQ9Y3E0 138 aa12.14□□□□□ -0.47
C9orf3-218ENST00000482056 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 SCGB2A1O75556 95 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 PDE6HQ13956 83 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 PSG3Q16557 428 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 SIGLEC15Q6ZMC9 328 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 CFHR4Q92496 578 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 URB1-AS1Q96HZ7 61 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
C9orf3-218ENST00000482056 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 LOC105371242A0A075B767 164 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 LEPROTL1O95214 131 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 TSPOP30536 169 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 FCGR2BP31994 310 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-218ENST00000482056 MFAP4P55083 255 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 HES1Q14469 280 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 C5orf64Q2M2E5 130 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 ZNF48Q96MX3 618 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-218ENST00000482056 CLEC5AQ9NY25 188 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 CCL21O00585 134 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 CRXO43186 299 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-218ENST00000482056 SIAH2O43255 324 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 CCDC144NLQ6NUI1 221 aa12.12□□□□□ -0.47
C9orf3-218ENST00000482056 APOHP02749 345 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-218ENST00000482056 PRTN3P24158 256 aa12.11□□□□□ -0.47
C9orf3-218ENST00000482056 CSN1S1P47710 185 aa12.11□□□□□ -0.47
C9orf3-218ENST00000482056 LDLRAD2Q5SZI1 272 aa12.11□□□□□ -0.47
C9orf3-218ENST00000482056 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-218ENST00000482056 ZNF414Q96IQ9 312 aa12.11□□□□□ -0.47
C9orf3-218ENST00000482056 LAMA5O15230 3695 aa12.11□□□□□ -0.47
C9orf3-218ENST00000482056 SH2D7A6NKC9 451 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-218ENST00000482056 ODF3BA8MYP8 253 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 GRNP28799 593 aaKnown RBP12.1□□□□□ -0.47
C9orf3-218ENST00000482056 FAM120AOSQ5T036 256 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 C17orf77Q96MU5 243 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 THYN1Q9P016 225 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 OR4C46A6NHA9 309 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 SYS1-DBNDD2H3BUS1 97 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 PSG9Q00887 426 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
C9orf3-218ENST00000482056 IGLV11-55A0A075B6I3 123 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 HSBP1L1C9JCN9 74 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 M0QZ24 198 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
C9orf3-218ENST00000482056 IGLL1P15814 213 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 CD24P25063 80 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 S100A7P31151 101 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms