RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TRAPPC8Q9Y2L5 1435 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 PIK3C2AO00443 1686 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 GAPVD1Q14C86 1478 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 BORCS7-ASMTA0A0B4J1R7 106 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 TRAV1-1A0A0B4J248 108 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 A8MWV9 139 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 MGST1P10620 155 aaKnown RBP2.61□□□□□ -1.99
COPA-203ENST00000481040 FABP2P12104 132 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 SDC2P34741 201 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 RPL35P42766 123 aaKnown RBP2.61□□□□□ -1.99
COPA-203ENST00000481040 PSG9Q00887 426 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 PATE2Q6UY27 113 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
COPA-203ENST00000481040 LINC00471Q8N535 108 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 ZNF418Q8TF45 676 aaPredicted RBP2.61□□□□□ -1.99
COPA-203ENST00000481040 LINC00467Q9BRT7 94 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 TMEM138Q9NPI0 162 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 MYH10P35580 1976 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 PKD1L2Q7Z442 2459 aa2.61□□□□□ -1.99
COPA-203ENST00000481040 ADGRB3O60242 1522 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 H3BRN7 92 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 IFNA4P05014 189 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 GPX2P18283 190 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 BRD3OSQ6XYD6 125 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 C7orf65Q6ZTY9 151 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 SLC50A1Q9BRV3 221 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 FAM107BQ9H098 131 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 CACYBPQ9HB71 228 aaKnown RBP2.6□□□□□ -1.99
COPA-203ENST00000481040 RAPGEF6Q8TEU7 1601 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 CPDO75976 1380 aa2.6□□□□□ -1.99
COPA-203ENST00000481040 VIRMAQ69YN4 1812 aaKnown RBP2.59□□□□□ -1.99
COPA-203ENST00000481040 GLI3P10071 1580 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 TMEM189A5PLL7 270 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 ZNF737O75373 536 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 C1QCP02747 245 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 UBBP0CG47 229 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 ZNF705BP0CI00 300 aaPredicted RBP2.59□□□□□ -1.99
COPA-203ENST00000481040 NDUFA6P56556 154 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 CKS1BP61024 79 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 Q8IYB0 196 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 OR5D16Q8NGK9 328 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 OR4K15Q8NH41 348 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 SPACA4Q8TDM5 124 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 LXNQ9BS40 222 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 TTTY12Q9BZ98 90 aa2.59□□□□□ -1.99
COPA-203ENST00000481040 PPRC1Q5VV67 1664 aaKnown RBP2.59□□□□□ -2
COPA-203ENST00000481040 TAF1LQ8IZX4 1826 aa2.58□□□□□ -2
COPA-203ENST00000481040 MYO5AQ9Y4I1 1855 aaKnown RBP2.58□□□□□ -2
COPA-203ENST00000481040 NHSL1Q5SYE7 1610 aa2.58□□□□□ -2
COPA-203ENST00000481040 TRPM1Q7Z4N2 1603 aa2.58□□□□□ -2
COPA-203ENST00000481040 M0QZK8 103 aa2.58□□□□□ -2
COPA-203ENST00000481040 RER1O15258 196 aa2.58□□□□□ -2
COPA-203ENST00000481040 DBIP07108 87 aaKnown RBP2.58□□□□□ -2
COPA-203ENST00000481040 BAALC-AS2P0C853 105 aa2.58□□□□□ -2
COPA-203ENST00000481040 MIFP14174 115 aa2.58□□□□□ -2
COPA-203ENST00000481040 ZNF846Q147U1 533 aa2.58□□□□□ -2
COPA-203ENST00000481040 VMA21Q3ZAQ7 101 aa2.58□□□□□ -2
COPA-203ENST00000481040 RNASE10Q5GAN6 216 aaKnown RBP2.58□□□□□ -2
COPA-203ENST00000481040 LINC00305Q7Z4B0 112 aa2.58□□□□□ -2
COPA-203ENST00000481040 OR8I2Q8N0Y5 310 aa2.58□□□□□ -2
COPA-203ENST00000481040 CST9LQ9H4G1 147 aa2.58□□□□□ -2
COPA-203ENST00000481040 OVOS2A0A0G2JMS6 1433 aa2.58□□□□□ -2
COPA-203ENST00000481040 PXDNLA1KZ92 1463 aa2.58□□□□□ -2
COPA-203ENST00000481040 FER1L6Q2WGJ9 1857 aa2.57□□□□□ -2
COPA-203ENST00000481040 TRBV7-6A0A0J9YX20 115 aa2.57□□□□□ -2
COPA-203ENST00000481040 LOC107984640A0A0U1RRK4 108 aa2.57□□□□□ -2
COPA-203ENST00000481040 P0DMU3 169 aa2.57□□□□□ -2
COPA-203ENST00000481040 FAM231AP0DMU4 169 aa2.57□□□□□ -2
COPA-203ENST00000481040 FAM231CP0DMU5 169 aa2.57□□□□□ -2
COPA-203ENST00000481040 CMPK1P30085 196 aa2.57□□□□□ -2
COPA-203ENST00000481040 SDC4P31431 198 aa2.57□□□□□ -2
COPA-203ENST00000481040 AKR1C3P42330 323 aa2.57□□□□□ -2
COPA-203ENST00000481040 PSPHP78330 225 aa2.57□□□□□ -2
COPA-203ENST00000481040 DEFB115Q30KQ5 88 aa2.57□□□□□ -2
COPA-203ENST00000481040 LINC00301Q8NCQ3 95 aa2.57□□□□□ -2
COPA-203ENST00000481040 TXNDC17Q9BRA2 123 aa2.57□□□□□ -2
COPA-203ENST00000481040 C14orf132Q9NPU4 83 aa2.57□□□□□ -2
COPA-203ENST00000481040 MAPKBP1O60336 1514 aa2.57□□□□□ -2
COPA-203ENST00000481040 TNFSF15O95150 251 aa2.56□□□□□ -2
COPA-203ENST00000481040 ASAH2BP0C7U1 165 aa2.56□□□□□ -2
COPA-203ENST00000481040 SSR2P43308 183 aa2.56□□□□□ -2
COPA-203ENST00000481040 KLRD1Q13241 179 aa2.56□□□□□ -2
COPA-203ENST00000481040 SMIM21Q3B7S5 101 aa2.56□□□□□ -2
COPA-203ENST00000481040 C4orf22Q6V702 233 aa2.56□□□□□ -2
COPA-203ENST00000481040 TEX29Q8N6K0 151 aa2.56□□□□□ -2
COPA-203ENST00000481040 TCEAL4Q96EI5 215 aa2.56□□□□□ -2
COPA-203ENST00000481040 RETNLBQ9BQ08 111 aa2.56□□□□□ -2
COPA-203ENST00000481040 ZFHX2Q9C0A1 2572 aaPredicted RBP2.56□□□□□ -2
COPA-203ENST00000481040 RTL9Q8NET4 1388 aa2.56□□□□□ -2
COPA-203ENST00000481040 A2MP01023 1474 aa2.56□□□□□ -2
COPA-203ENST00000481040 ANAPC1Q9H1A4 1944 aa2.56□□□□□ -2
COPA-203ENST00000481040 C9JAW5 83 aa2.55□□□□□ -2
COPA-203ENST00000481040 OR1I1O60431 355 aa2.55□□□□□ -2
COPA-203ENST00000481040 KIF21BO75037 1637 aa2.55□□□□□ -2
COPA-203ENST00000481040 DPM2O94777 84 aa2.55□□□□□ -2
COPA-203ENST00000481040 PROSCO94903 275 aa2.55□□□□□ -2
COPA-203ENST00000481040 UBL3O95164 117 aa2.55□□□□□ -2
COPA-203ENST00000481040 SCTP09683 121 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms