RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZNF767PQ75MW2 155 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 ZNF101Q8IZC7 436 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 C8orf59Q8N0T1 100 aaPredicted RBP5.48□□□□□ -1.53
LSM5-210ENST00000480956 CD177Q8N6Q3 437 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.48□□□□□ -1.53
LSM5-210ENST00000480956 TERB2Q8NHR7 220 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 SCN3BQ9NY72 215 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 SOX21Q9Y651 276 aaPredicted RBP5.48□□□□□ -1.53
LSM5-210ENST00000480956 MYH6P13533 1939 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 BAZ2BQ9UIF8 2168 aaKnown RBP5.48□□□□□ -1.53
LSM5-210ENST00000480956 DOCK4Q8N1I0 1966 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 FAM168BA1KXE4 195 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 IFNA17P01571 189 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 CXCL1P09341 107 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 ZNF728P0DKX0 622 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 IGHV3-30-3P0DP02 117 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 ADM2Q7Z4H4 148 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 TEX29Q8N6K0 151 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 RBMXL1Q96E39 390 aaKnown RBP5.48□□□□□ -1.53
LSM5-210ENST00000480956 XAGE1AQ9HD64 81 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 LINC00588Q9Y4M8 146 aa5.48□□□□□ -1.53
LSM5-210ENST00000480956 SVILO95425 2214 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 PCNTO95613 3336 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 TRAV13-1A0A0B4J241 112 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 A8MWP4 228 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 H3BMG7 143 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 NDUFB2O95178 105 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 APODP05090 189 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 HLA-EP13747 358 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 RPL22P35268 128 aaKnown RBP5.47□□□□□ -1.53
LSM5-210ENST00000480956 RHOGP84095 191 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 CCSMST1Q4G0I0 132 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 C3orf22Q8N5N4 141 aa5.47□□□□□ -1.53
LSM5-210ENST00000480956 MRPL32Q9BYC8 188 aaKnown RBP5.47□□□□□ -1.53
LSM5-210ENST00000480956 IGLV3-10A0A075B6K4 115 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 A0A087X0T9 212 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 C1QAP02745 245 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 TRGV3P03979 118 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 PKIAP61925 76 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 RELAQ04206 551 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 TEX261Q6UWH6 196 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 C18orf65Q6ZTR6 163 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 ACBD7Q8N6N7 88 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 WFDC5Q8TCV5 224 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 MGLLQ99685 303 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 ADAT1Q9BUB4 502 aaKnown RBP5.46□□□□□ -1.54
LSM5-210ENST00000480956 C11orf1Q9H5F2 150 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 MYH11P35749 1972 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 DOCK1Q14185 1865 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 KIAA1671Q9BY89 1806 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 SSC5DA1L4H1 1573 aa5.46□□□□□ -1.54
LSM5-210ENST00000480956 ZNF670-ZNF695F2Z2N8 137 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 IGKV1D-33P01593 117 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 IGKV1-33P01594 117 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 NANOS3P60323 173 aaKnown RBP5.45□□□□□ -1.54
LSM5-210ENST00000480956 HIST1H4AP62805 103 aaKnown RBP5.45□□□□□ -1.54
LSM5-210ENST00000480956 HBBP68871 147 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 BPIFA4PQ86YQ2 179 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.45□□□□□ -1.54
LSM5-210ENST00000480956 YPEL2Q96QA6 119 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 MARCOQ9UEW3 520 aaPredicted RBP5.45□□□□□ -1.54
LSM5-210ENST00000480956 SCN4AP35499 1836 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 IGKV1-9A0A0C4DH69 117 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 LOC100130705A0A1B0GUX0 176 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 A0A1B0GVG6 124 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 M0R143 59 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 SLC25A20O43772 301 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 HLA-DMBP28068 263 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 HES1Q14469 280 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 C16orf47Q6ZP98 133 aaPredicted RBP5.45□□□□□ -1.54
LSM5-210ENST00000480956 ZNF355PQ9NSJ1 428 aa5.45□□□□□ -1.54
LSM5-210ENST00000480956 WDR90Q96KV7 1748 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 DSPPQ9NZW4 1301 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 UBFD1O14562 309 aaKnown RBP5.44□□□□□ -1.54
LSM5-210ENST00000480956 SH2D1AO60880 128 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 CCL3P10147 92 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 SLC25A16P16260 332 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 DYNLT3P51808 116 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 FXYD7P58549 80 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 LDLRAD2Q5SZI1 272 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 C10orf91Q5T1B1 145 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 PHF5AQ7RTV0 110 aaKnown RBP5.44□□□□□ -1.54
LSM5-210ENST00000480956 MIR7-3HGQ8N6C7 128 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 BANF2Q9H503 90 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 OSTCQ9NRP0 149 aa5.44□□□□□ -1.54
LSM5-210ENST00000480956 AKAIN1P0CW23 69 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 GNG4P50150 75 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 ARPP19P56211 112 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 GNB2P62879 340 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 IGLV3-21P80748 117 aaPredicted RBP5.43□□□□□ -1.54
LSM5-210ENST00000480956 AKR1C1Q04828 323 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 C15orf32Q32M92 178 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 NAA38Q9BRA0 125 aaKnown RBP5.43□□□□□ -1.54
LSM5-210ENST00000480956 PLA2G2FQ9BZM2 168 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 ANKRD12Q6UB98 2062 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 DENND4CQ5VZ89 1909 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 PHIPQ8WWQ0 1821 aa5.43□□□□□ -1.54
LSM5-210ENST00000480956 BBIP1A8MTZ0 92 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms