RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FGF16O43320 207 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 HIST3H2BBQ8N257 126 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 RAMP3O60896 148 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 WBP1Q96G27 269 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 TRBV24-1A0A075B6N3 115 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 WFDC6Q9BQY6 131 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 M0R1W7 72 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 TIMP3P35625 211 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 C9orf139Q6ZV77 190 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 GLRX5Q86SX6 157 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 HIST1H2BLQ99880 126 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 FAM223BA6NKX1 122 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 ADMP35318 185 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 Q5BKY6 102 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 ATRAIDQ6UW56 229 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 FAM223AQ8IWN6 122 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 RPRMLQ8N4K4 120 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 PSCAO43653 123 aa7.91□□□□□ -1.14
VEGFA-212ENST00000480614 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 ST6GALNAC3Q8NDV1 305 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 LINC00477Q96M19 166 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 TEX38Q6PEX7 206 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 FOXL1Q12952 345 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 VWC2LB2RUY7 222 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 LAIR2Q6ISS4 152 aa7.9□□□□□ -1.14
VEGFA-212ENST00000480614 FNDC4Q9H6D8 234 aaPredicted RBP7.9□□□□□ -1.14
VEGFA-212ENST00000480614 DLEU1O43261 78 aa7.9□□□□□ -1.15
VEGFA-212ENST00000480614 LYPD1Q8N2G4 141 aa7.9□□□□□ -1.15
VEGFA-212ENST00000480614 MUC21A0A0G2JKD1 596 aa7.9□□□□□ -1.15
VEGFA-212ENST00000480614 MUC21A0A140T8X8 626 aa7.9□□□□□ -1.15
VEGFA-212ENST00000480614 CEACAM8P31997 349 aaPredicted RBP7.9□□□□□ -1.15
VEGFA-212ENST00000480614 C1orf194Q5T5A4 169 aa7.9□□□□□ -1.15
VEGFA-212ENST00000480614 IGHV2-26A0A0B4J1V2 119 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 ZNF138P52744 262 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
VEGFA-212ENST00000480614 KLF17Q5JT82 389 aaPredicted RBP7.89□□□□□ -1.15
VEGFA-212ENST00000480614 RCHY1Q96PM5 261 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 EPOPA6NHQ4 379 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 B4DSR2 109 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 EVI2AP22794 236 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 H3BMM0 161 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 SAP30O75446 220 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 Q5PR19 223 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
VEGFA-212ENST00000480614 INAFM2P0DMQ5 153 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 USP9YO00507 2555 aaPredicted RBP7.89□□□□□ -1.15
VEGFA-212ENST00000480614 IGHV3OR16-8A0A075B7F1 116 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 C5orf64Q2M2E5 130 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 GATD1Q8NB37 220 aa7.89□□□□□ -1.15
VEGFA-212ENST00000480614 TMEM249Q2WGJ8 235 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 PTPRBP23467 1997 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 PDE6HQ13956 83 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 GGTLC1Q9BX51 225 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 LDLRAD4O15165 306 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 EFNA4P52798 201 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 TIMM23O14925 209 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 CCL3L1P16619 93 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 TIMM21Q9BVV7 248 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 TRAV40A0A0B4J280 105 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 SPANXCQ9NY87 97 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 ANAPC10Q9UM13 185 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 FNDC10F2Z333 226 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 CSRP3P50461 194 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 ID3Q02535 119 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 SS18Q15532 418 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 WDR83OSQ9Y284 106 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 GATA3P23771 443 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 SSBP2P81877 361 aaPredicted RBP7.88□□□□□ -1.15
VEGFA-212ENST00000480614 C1QTNF9P0C862 333 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 AGMATQ9BSE5 352 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 ATG2AQ2TAZ0 1938 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 SRRM4A7MD48 611 aaKnown RBP7.88□□□□□ -1.15
VEGFA-212ENST00000480614 COLCA2A8K830 154 aa7.88□□□□□ -1.15
VEGFA-212ENST00000480614 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.87□□□□□ -1.15
VEGFA-212ENST00000480614 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
VEGFA-212ENST00000480614 MRPL14Q6P1L8 145 aaKnown RBP7.87□□□□□ -1.15
VEGFA-212ENST00000480614 OCC1Q8TAD7 63 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 TRAV8-1A0A0A6YYK1 113 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 A0A1B0GWJ7 208 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 PYYP10082 97 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
VEGFA-212ENST00000480614 CTSBP07858 339 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 UBE2V1Q13404 147 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 C2orf82Q6UX34 121 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 TRGV1A0A0A0MS02 117 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 RHODO00212 210 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 SPRED2Q7Z698 418 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 GZMBP10144 247 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 CD33P20138 364 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 SRRM5B3KS81 715 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 CDKN1AP38936 164 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 ASCL4Q6XD76 172 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 INS-IGF2F8WCM5 200 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 RPUSD1Q9UJJ7 312 aaKnown RBP7.87□□□□□ -1.15
VEGFA-212ENST00000480614 ESDP10768 282 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 NSUN5P1Q3KNT7 163 aa7.87□□□□□ -1.15
VEGFA-212ENST00000480614 RNF222A6NCQ9 220 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 TMEM8BA6NDV4 472 aa7.86□□□□□ -1.15
VEGFA-212ENST00000480614 AMBPP02760 352 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms