RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 OR10P1Q8NGE3 313 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 C2orf50Q96LR7 162 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 RNF2Q99496 336 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 NMES1Q9C002 83 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 TUBA4BQ9H853 241 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 EDA2RQ9HAV5 297 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 NRN1Q9NPD7 142 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 LYRM2Q9NU23 88 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 MRPL36Q9P0J6 103 aaKnown RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 FLVCR2Q9UPI3 526 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 COL7A1Q02388 2944 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 RBMY1BA6NDE4 496 aaKnown RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 RBMY1EA6NEQ0 496 aaKnown RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 ZFP92A6NM28 416 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 A8MTW9 85 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 WRBO00258 174 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 ISLRO14498 428 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 JTBO76095 146 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 MBPP02686 304 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 IL4P05112 153 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 RBMY1DP0C7P1 496 aaKnown RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 SPP1P10451 314 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 P2RY1P47900 373 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 PSMB3P49720 205 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 FAM3BP58499 235 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 GUCA2BQ16661 112 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 TMEM88Q6PEY1 159 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 MORN3Q6PF18 240 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 TCF24Q7RTU0 167 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 NRARPQ7Z6K4 114 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 ZNF546Q86UE3 836 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 TMEM217Q8N7C4 229 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 OR1B1Q8NGR6 318 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 ENKURQ8TC29 256 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 RCHY1Q96PM5 261 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 C20orf24Q9BUV8 137 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 MS4A6AQ9H2W1 248 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 MAP6D1Q9H9H5 199 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 RABAC1Q9UI14 185 aa3.61□□□□□ -1.83
PTCD3-213ENST00000480102 RCL1Q9Y2P8 373 aaKnown RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 DYNC2H1Q8NCM8 4307 aaKnown RBP3.61□□□□□ -1.83
PTCD3-213ENST00000480102 A0A087X0K7 114 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 MPTX1A8MV57 137 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 E5RGE8 158 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 INMT-MINDY4F8WBC2 141 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SOCS3O14543 225 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 ZNF253O75346 499 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 RLN2P04090 185 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 PET100P0DJ07 73 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 RPL7P18124 248 aaKnown RBP3.6□□□□□ -1.83
PTCD3-213ENST00000480102 ID1P41134 155 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 RPL29P47914 159 aaKnown RBP3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SULT1A1P50225 295 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 NUTF2P61970 127 aaKnown RBP3.6□□□□□ -1.83
PTCD3-213ENST00000480102 HBG1P69891 147 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 HBG2P69892 147 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 IFITM3Q01628 133 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 RAB31Q13636 194 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 TIGITQ495A1 244 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SPINK9Q5DT21 86 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SPANXN5Q5MJ07 72 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 GSG1LQ6UXU4 331 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 DEFB125Q8N687 156 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 ARL6IP6Q8N6S5 226 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 RNF183Q96D59 192 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 ACY3Q96HD9 319 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 C1QTNF4Q9BXJ3 329 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 PARD6GQ9BYG4 376 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-213ENST00000480102 CSTL1Q9H114 145 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 C11orf68Q9H3H3 251 aaKnown RBP3.6□□□□□ -1.83
PTCD3-213ENST00000480102 HRH4Q9H3N8 390 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SRD5A3Q9H8P0 318 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 KCNIP2Q9NS61 270 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 PSENENQ9NZ42 101 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 S4R3C0 116 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 SORL1Q92673 2214 aa3.6□□□□□ -1.83
PTCD3-213ENST00000480102 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 ZNF705EA8MWA4 302 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-213ENST00000480102 DNASE2O00115 360 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-213ENST00000480102 SSSCA1O60232 199 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 AMBPP02760 352 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 LYL1P12980 280 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 HLA-DRB4P13762 266 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 GALR1P47211 349 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 TCTAP57738 103 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 B2MP61769 119 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 ZNF90Q03938 601 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 PDE6HQ13956 83 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 GUK1Q16774 197 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 FOXI2Q6ZQN5 318 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 CYP2G1PQ6ZSU1 146 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.83
PTCD3-213ENST00000480102 STX12Q86Y82 276 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 TMEM252Q8N6L7 170 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 226.3 ms