RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 HSBP1O75506 76 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 RBBP9O75884 186 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 HPRT1P00492 218 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 IGHG2P01859 326 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 CD3GP09693 182 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 GADD45AP24522 165 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 PAX6P26367 422 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 BLVRBP30043 206 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-205ENST00000479712 RAB13P51153 203 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 BLCAPP62952 87 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 KIR2DS1Q14954 304 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 LINC01551Q86U37 167 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 DRAM1Q8N682 238 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 C5orf56Q8N8D9 126 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-205ENST00000479712 OR51D1Q8NGF3 324 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 OR6Q1Q8NGQ2 317 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 OR2T10Q8NGZ9 312 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 OR4K15Q8NH41 348 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 OR1L1Q8NH94 360 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 RTN4IP1Q8WWV3 396 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-205ENST00000479712 RNF5Q99942 180 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 SAV1Q9H4B6 383 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-205ENST00000479712 OR2S2Q9NQN1 319 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 TXNL4BQ9NX01 149 aaKnown RBP3.34□□□□□ -1.87
UPF3A-205ENST00000479712 SSR3Q9UNL2 185 aa3.34□□□□□ -1.87
UPF3A-205ENST00000479712 A0A087WXM4 84 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 OR5H14A6NHG9 310 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 MFNGO00587 321 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 SOCS1O15524 211 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 TNFAIP8O95379 198 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 IGKV1D-33P01593 117 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 IGKV1-33P01594 117 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 TLX1NBP0CAT3 122 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 HIST1H1DP16402 221 aaKnown RBP3.33□□□□□ -1.88
UPF3A-205ENST00000479712 DTYMKP23919 212 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 PSMB9P28065 219 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 GNG10P50151 68 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 HLA-DRB3P79483 266 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 PRR3P79522 188 aaKnown RBP3.33□□□□□ -1.88
UPF3A-205ENST00000479712 PITPNAQ00169 270 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 RPEL1Q2QD12 228 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 OR10K2Q6IF99 312 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF833PQ6ZTB9 187 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 C6orf201Q7Z4U5 140 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 VKORC1L1Q8N0U8 176 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 OR4X2Q8NGF9 303 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 LEAP2Q969E1 77 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 KCTD7Q96MP8 289 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 CMSS1Q9BQ75 279 aaKnown RBP3.33□□□□□ -1.88
UPF3A-205ENST00000479712 AGMATQ9BSE5 352 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 FAAP24Q9BTP7 215 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 PECRQ9BY49 303 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 ABCG5Q9H222 651 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 DCSTAMPQ9H295 470 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
UPF3A-205ENST00000479712 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 MTFP1Q9UDX5 166 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 AK3Q9UIJ7 227 aa3.33□□□□□ -1.88
UPF3A-205ENST00000479712 TNCP24821 2201 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 IGLV4-69A0A075B6H9 119 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 TRBV6-7A0A0A0MS04 114 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 IGHV3-43A0A0B4J1X8 118 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 H7C1H1 209 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 FABP7O15540 132 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 SLC22A5O76082 557 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 NDUFA3O95167 84 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 HLA-DRB1P01911 266 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 CTXN2P0C2S0 81 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 SPNP16150 400 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 CD36P16671 472 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 PPP1CCP36873 323 aaKnown RBP3.32□□□□□ -1.88
UPF3A-205ENST00000479712 SLC35B1P78383 322 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 MRPS15P82914 257 aaKnown RBP3.32□□□□□ -1.88
UPF3A-205ENST00000479712 DIAPH2-AS1Q14236 149 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 HES1Q14469 280 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF266Q14584 549 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 MSMO1Q15800 293 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 LTC4SQ16873 150 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 SFXN4Q6P4A7 337 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 SLC35E3Q7Z769 313 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 Q8N9L7 120 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 ARHGAP5-AS1Q96IT6 56 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 ZNF251Q9BRH9 671 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 MCUBQ9NWR8 336 aa3.32□□□□□ -1.88
UPF3A-205ENST00000479712 IGKV1-6A0A0C4DH72 117 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 H0YJW9 148 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 IGHV3-7P01780 117 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 SAA2P0DJI9 122 aaPredicted RBP3.31□□□□□ -1.88
UPF3A-205ENST00000479712 CD24P25063 80 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 SDC2P34741 201 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 MYCNOSP40205 109 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 LGALS7P47929 136 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 CLDN12P56749 244 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 OR10A3P58181 314 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 ACTBP60709 375 aa3.31□□□□□ -1.88
UPF3A-205ENST00000479712 C5orf64Q2M2E5 130 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms