RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 J3QW42 95 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 HBDP02042 147 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 BMI1P35226 326 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 FER1L6-AS1Q8NA97 138 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 WFDC12Q8WWY7 111 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 ADAMTS9Q9P2N4 1935 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 IGHV1-18A0A0C4DH31 117 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 IGHV1-24A0A0C4DH33 117 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 RNASE2P10153 161 aaKnown RBP10.99□□□□□ -0.65
USP42-206ENST00000479544 RNFT1Q5M7Z0 435 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 LY96Q9Y6Y9 160 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 NUP210Q8TEM1 1887 aaPredicted RBP10.99□□□□□ -0.65
USP42-206ENST00000479544 PRUNE2Q8WUY3 3088 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 VKORC1Q9BQB6 163 aa10.99□□□□□ -0.65
USP42-206ENST00000479544 PSG3Q16557 428 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 MORN5Q5VZ52 161 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 MMP23AO75900 390 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 LYZL1Q6UWQ5 148 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 ZNF479Q96JC4 524 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 K7EMI3 77 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 OR5AN1Q8NGI8 311 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 CHODLQ9H9P2 273 aa10.98□□□□□ -0.65
USP42-206ENST00000479544 IGKV2-40A0A087WW87 121 aaPredicted RBP10.97□□□□□ -0.65
USP42-206ENST00000479544 TMEM213A2RRL7 107 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 IGKV2D-40P01614 121 aaPredicted RBP10.97□□□□□ -0.65
USP42-206ENST00000479544 DPF1Q92782 380 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 JMJD8Q96S16 334 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 RNF114Q9Y508 228 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 IGLC7A0M8Q6 106 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 K7EP13 123 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 LGALS7P47929 136 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 SSBP2P81877 361 aaPredicted RBP10.97□□□□□ -0.65
USP42-206ENST00000479544 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 HSD52Q0P140 79 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 ETDBQ3ZM63 59 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 ATP5L2Q7Z4Y8 100 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 CENPVQ7Z7K6 275 aaPredicted RBP10.97□□□□□ -0.65
USP42-206ENST00000479544 MS4A6AQ9H2W1 248 aa10.97□□□□□ -0.65
USP42-206ENST00000479544 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.65
USP42-206ENST00000479544 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
USP42-206ENST00000479544 LOC105371242A0A075B767 164 aa10.96□□□□□ -0.65
USP42-206ENST00000479544 PPIAL4CA0A0B4J2A2 164 aa10.96□□□□□ -0.65
USP42-206ENST00000479544 SRRM4A7MD48 611 aaKnown RBP10.96□□□□□ -0.65
USP42-206ENST00000479544 PPIAL4GP0DN37 164 aa10.96□□□□□ -0.65
USP42-206ENST00000479544 ERVK11-1P61568 191 aa10.96□□□□□ -0.65
USP42-206ENST00000479544 RABAC1Q9UI14 185 aa10.96□□□□□ -0.65
USP42-206ENST00000479544 C2orf16Q68DN1 1984 aa10.96□□□□□ -0.66
USP42-206ENST00000479544 IGKV3-15P01624 115 aa10.96□□□□□ -0.66
USP42-206ENST00000479544 ESDP10768 282 aa10.96□□□□□ -0.66
USP42-206ENST00000479544 ATP5IP56385 69 aaPredicted RBP10.96□□□□□ -0.66
USP42-206ENST00000479544 CEACAM3P40198 252 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 ZC2HC1BQ5TFG8 222 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 IGHV2-70DA0A0C4DH43 119 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 LY6G6EA0A0G2JKS1 128 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 MFAP4P55083 255 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 PAX2Q02962 417 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 CHD8Q9HCK8 2581 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 U3KQA8 63 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 CDKN1BP46527 198 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 FAM74A4Q5TZK3 123 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 AMTNQ6UX39 209 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 Q8NFD4 153 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 TP53TG3Q9ULZ0 132 aa10.95□□□□□ -0.66
USP42-206ENST00000479544 K7ERJ3 54 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 OR4X2Q8NGF9 303 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 CYSLTR1Q9Y271 337 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 SMIM27A0A1W2PRY6 76 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 FTH1P19P0C7X4 201 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 RPL13AP40429 203 aaKnown RBP10.94□□□□□ -0.66
USP42-206ENST00000479544 MEF2CQ06413 473 aaPredicted RBP10.94□□□□□ -0.66
USP42-206ENST00000479544 LYRM7Q5U5X0 104 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 C11orf52Q96A22 123 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 C16orf92Q96LL3 132 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 FAM90A9PA6NNJ1 464 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 CD3EP07766 207 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 SRSF6Q13247 344 aaKnown RBP10.94□□□□□ -0.66
USP42-206ENST00000479544 ADAMTSL5Q6ZMM2 481 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 PPP1R27Q86WC6 154 aa10.94□□□□□ -0.66
USP42-206ENST00000479544 HERVK_113P61574 105 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 TMEM14BQ9NUH8 114 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 PHLDA3Q9Y5J5 127 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 LINC00312Q9Y6C7 94 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 KIAA1549LQ6ZVL6 1849 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 KHDC1LQ5JSQ8 128 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
USP42-206ENST00000479544 TMEM133Q9H2Q1 129 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 SZT2Q5T011 3432 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 IGKV3-20P01619 116 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 PRR20EP86478 221 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 PRR20CP86479 221 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 PRR20DP86480 221 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 PRR20BP86481 221 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 PRR20AP86496 221 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms