RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MTORP42345 2549 aa4.87□□□□□ -1.63
SF3B1-209ENST00000479532 TEP1Q99973 2627 aaKnown RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 DUXBA0A1W2PPF3 345 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM89A2RUT3 159 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 MAP1LC3B2A6NCE7 125 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 C5orf51A6NDU8 294 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 E5RGE8 158 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 RBMXL2O75526 392 aaKnown RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 DEDDO75618 318 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 KBTBD11O94819 623 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 CA2P00918 260 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 KRASP01116 189 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 IGHG2P01859 326 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 UCP1P25874 307 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 RPL12P30050 165 aaKnown RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 G6PCP35575 357 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 AKR1C3P42330 323 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 BLCAPP62952 87 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 TNXAQ16473 311 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 POU2AF1Q16633 256 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 SP6Q3SY56 376 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 RPL7L1Q6DKI1 246 aaKnown RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF562Q6V9R5 426 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF429Q86V71 674 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 LGI3Q8N145 548 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 Q8N2B8 174 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 ADAD2Q8NCV1 583 aaKnown RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 OR4A16Q8NH70 328 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 ARPC1AQ92747 370 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 IL22RA2Q969J5 263 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 GNPNAT1Q96EK6 184 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 RITA1Q96K30 269 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 CITED2Q99967 270 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-209ENST00000479532 VAMP8Q9BV40 100 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 COMMD5Q9GZQ3 224 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 MAP1LC3BQ9GZQ8 125 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM222Q9H0R3 208 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 CST9LQ9H4G1 147 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 SPANXA1Q9NS26 97 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 PRNDQ9UKY0 176 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 FUT9Q9Y231 359 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 NSG2Q9Y328 171 aa4.86□□□□□ -1.63
SF3B1-209ENST00000479532 ZFHX3Q15911 3703 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 IGHV7-81A0A0B4J1V7 117 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 SERTM2A0A1B0GWG4 89 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 PSMB11A5LHX3 300 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 SH2D7A6NKC9 451 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 SRRM4A7MD48 611 aaKnown RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 SOX15O60248 233 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 CDS2O95674 445 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 IGLV2-23P01705 113 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 CRYGCP07315 174 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 CRYGBP07316 175 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 PFN1P07737 140 aaKnown RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 OR5G3P0C626 314 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 MDKP21741 143 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 RPL27AP46776 148 aaKnown RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 CNN1P51911 297 aaKnown RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 TPPP2P59282 170 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 RPL8P62917 257 aaKnown RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 CX3CL1P78423 397 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM187Q14656 261 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 FXYD3Q14802 87 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 KRTAP21-3Q3LHN1 58 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 LRRC37A5PQ49AS3 106 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF585BQ52M93 769 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 TCTEX1D4Q5JR98 221 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 OR4A47Q6IF82 309 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 PRR27Q6MZM9 219 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 VKORC1L1Q8N0U8 176 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 C3orf56Q8N813 242 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 OR4X2Q8NGF9 303 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 LINC01006Q8NI28 216 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM167AQ8TBQ9 72 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM230Q96A57 120 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 CIB3Q96Q77 187 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-209ENST00000479532 SPIN2AQ99865 258 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 SPIN2BQ9BPZ2 258 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 FBXL17Q9UF56 701 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 ZNF580Q9UK33 172 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 LAMTOR2Q9Y2Q5 125 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 WSB1Q9Y6I7 421 aa4.85□□□□□ -1.63
SF3B1-209ENST00000479532 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 MSGN1A6NI15 193 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 CORTO00230 105 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 UPK2O00526 184 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 ATP6V0E1O15342 81 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 IGF1P05019 195 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 CTRLP40313 264 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 CDC34P49427 236 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-209ENST00000479532 COMPP49747 757 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-209ENST00000479532 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 ECSCRQ19T08 205 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 COX19Q49B96 90 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 TMEM41BQ5BJD5 291 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 UNQ5815/PRO19632Q6UWF5 114 aa4.84□□□□□ -1.63
SF3B1-209ENST00000479532 CYP2G1PQ6ZSU1 146 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms