RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 REV3LO60673 3130 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 HCFC1P51610 2035 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 ZNF664Q8N3J9 261 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 OR4C5Q8NGB2 326 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 Q8TAT8 98 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 HIVEP2P31629 2446 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 LOC102724200A0A096LPH7 203 aaPredicted RBP8.88□□□□□ -0.99
COL27A1-204ENST00000477421 DLX6P56179 175 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 HSPB8Q9UJY1 196 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 F11RQ9Y624 299 aaKnown RBP8.88□□□□□ -0.99
COL27A1-204ENST00000477421 LHBP01229 141 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 TPTE2P1Q5T6R2 138 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 MORN5Q5VZ52 161 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 ZNF841Q6ZN19 808 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 VMO1Q7Z5L0 202 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 RITA1Q96K30 269 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 C7orf69Q9H7B7 122 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 IGKV2-40A0A087WW87 121 aaPredicted RBP8.88□□□□□ -0.99
COL27A1-204ENST00000477421 C9JCJ5 164 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 IGKV2D-40P01614 121 aaPredicted RBP8.88□□□□□ -0.99
COL27A1-204ENST00000477421 BMI1P35226 326 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 UQCRFS1P47985 274 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 RBPMS2Q6ZRY4 209 aaKnown RBP8.88□□□□□ -0.99
COL27A1-204ENST00000477421 PSG8Q9UQ74 426 aa8.88□□□□□ -0.99
COL27A1-204ENST00000477421 TNRC6AQ8NDV7 1962 aaKnown RBP8.88□□□□□ -0.99
COL27A1-204ENST00000477421 ABCA12Q86UK0 2595 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 A4D1N5 150 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 E7EUB6 86 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 ITGB1BP1O14713 200 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 ZNF324O75467 553 aaPredicted RBP8.87□□□□□ -0.99
COL27A1-204ENST00000477421 APOHP02749 345 aaPredicted RBP8.87□□□□□ -0.99
COL27A1-204ENST00000477421 TCRAP04437 139 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 FXYD7P58549 80 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 NUP35Q8NFH5 326 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 GLMPQ8WWB7 406 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 TRBV20OR9-2A0A075B6H5 130 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 ATP5G2Q06055 141 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 ZNF833PQ6ZTB9 187 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 BPESC1Q9GZL8 116 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 UQCR10Q9UDW1 63 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 TRAV40A0A0B4J280 105 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 TCF21O43680 179 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 GNLYP22749 145 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 C15orf32Q32M92 178 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 TEX36Q5VZQ5 186 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
COL27A1-204ENST00000477421 FMC1Q96HJ9 113 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 NDUFAF3Q9BU61 184 aa8.87□□□□□ -0.99
COL27A1-204ENST00000477421 A0A1B0GWJ7 208 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 C5orf64Q2M2E5 130 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 COL5A1-AS1Q5SY13 56 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 TMEM70Q9BUB7 260 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 GNB1LQ9BYB4 327 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 CEACAM4O75871 244 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 SRD5A1P18405 259 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 DMRTA1Q5VZB9 504 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 TSKUQ8WUA8 353 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 FAM168AQ92567 244 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 TNFRSF14Q92956 283 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 CCL19Q99731 98 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 OTORQ9NRC9 128 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 FREM2Q5SZK8 3169 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 NCKAP5O14513 1909 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 OR4C46A6NHA9 309 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 M0R381 172 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 SIAH2O43255 324 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 PRR20EP86478 221 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 PRR20CP86479 221 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 PRR20DP86480 221 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 PRR20BP86481 221 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 PRR20AP86496 221 aa8.86□□□□□ -0.99
COL27A1-204ENST00000477421 CIDEAO60543 219 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
COL27A1-204ENST00000477421 SHISA9B4DS77 424 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 C22orf46C9J442 243 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 NDPQ00604 133 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 PSG9Q00887 426 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 DPF1Q92782 380 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 VPS25Q9BRG1 176 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 JMJD1CQ15652 2540 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 K7EN84 100 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 TNFRSF6BO95407 300 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 CENPVQ7Z7K6 275 aaPredicted RBP8.85□□□□□ -0.99
COL27A1-204ENST00000477421 DMRTC2Q8IXT2 367 aaPredicted RBP8.85□□□□□ -0.99
COL27A1-204ENST00000477421 TRGV9Q99603 122 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 PIMREGQ9BSJ6 248 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 LSM4Q9Y4Z0 139 aaKnown RBP8.85□□□□□ -0.99
COL27A1-204ENST00000477421 NACAE9PAV3 2078 aa8.85□□□□□ -0.99
COL27A1-204ENST00000477421 DSPP15924 2871 aaKnown RBP8.84□□□□□ -0.99
COL27A1-204ENST00000477421 F2Z2F3 143 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 M0QZK8 103 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 ZNF329Q86UD4 541 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 EEF1AKMT3Q96AZ1 226 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 ATP6V0BQ99437 205 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms