RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TRAV8-1A0A0A6YYK1 113 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 VCYO14598 125 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 NR2C2APQ86WQ0 139 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 GAFA1Q96PS6 74 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 GAGE2BQ13066 116 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 LCN12Q6JVE5 192 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 MAPK1IP1LQ8NDC0 245 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 NABP1Q96AH0 204 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 FBLN5Q9UBX5 448 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 LY6G6FQ5SQ64 297 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 MGST2Q99735 147 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 ACACAQ13085 2346 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 LINC01549A6NIU2 74 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 C9orf139Q6ZV77 190 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 USMG5Q96IX5 58 aa15.18■□□□□ 0.02
VARS2-209ENST00000477288 CEACAM8P31997 349 aaPredicted RBP15.18■□□□□ 0.02
VARS2-209ENST00000477288 H0YJW9 148 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 SPXQ9BT56 116 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 BTCP35070 178 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 CFHR3Q02985 330 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 DOCK6Q96HP0 2047 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 GUSBP1Q15486 140 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 PDCD11Q14690 1871 aaKnown RBP15.17■□□□□ 0.02
VARS2-209ENST00000477288 hDV102S1A0JD36 115 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 SEC11AP67812 179 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 ZFAND6Q6FIF0 208 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 RNF5Q99942 180 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 TRPM7Q96QT4 1865 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 SMKR1H3BMG3 65 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 BMPERQ8N8U9 685 aa15.17■□□□□ 0.02
VARS2-209ENST00000477288 GREB1Q4ZG55 1949 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 FAM223BA6NKX1 122 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 SYNJ2BPP57105 145 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 RUSC1-AS1Q66K80 236 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 LYPD2Q6UXB3 125 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 FAM223AQ8IWN6 122 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 IGKV1-27A0A075B6S5 117 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 ESDP10768 282 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 LINC00477Q96M19 166 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 SUMO4Q6EEV6 95 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 RHPN1-AS1Q9BWJ2 59 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 A0A0G2JMZ2 1700 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 LRRC37A2A6NM11 1700 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 GAGE2AQ6NT46 116 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 PRIMA1Q86XR5 153 aa15.16■□□□□ 0.02
VARS2-209ENST00000477288 SAA4P35542 130 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 TRGV9Q99603 122 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 MDS2Q8NDY4 140 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 MSRB2Q9Y3D2 182 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 KLF12Q9Y4X4 402 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 FAM90A2PQ658T7 463 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 PSG3Q16557 428 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 TMEM158Q8WZ71 300 aa15.15■□□□□ 0.02
VARS2-209ENST00000477288 CXCL1P09341 107 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 HGFACQ04756 655 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 ZNF114Q8NC26 417 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 F8VVB4 439 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 F8VWA3 439 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 MYMXA0A1B0GTQ4 84 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 TIMM21Q9BVV7 248 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 ESPL1Q14674 2120 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 Q71RC1 249 aaPredicted RBP15.14■□□□□ 0.01
VARS2-209ENST00000477288 HIST1H2BLQ99880 126 aa15.14■□□□□ 0.01
VARS2-209ENST00000477288 SSBP2P81877 361 aaPredicted RBP15.13■□□□□ 0.01
VARS2-209ENST00000477288 ZNF362Q5T0B9 420 aaPredicted RBP15.13■□□□□ 0.01
VARS2-209ENST00000477288 CHD5Q8TDI0 1954 aa15.13■□□□□ 0.01
VARS2-209ENST00000477288 A0A087X0K7 114 aa15.13■□□□□ 0.01
VARS2-209ENST00000477288 MBD3L4A6NDZ8 208 aaPredicted RBP15.13■□□□□ 0.01
VARS2-209ENST00000477288 MBD3L3A6NE82 208 aaPredicted RBP15.13■□□□□ 0.01
VARS2-209ENST00000477288 MBD3L5A6NJ08 208 aaPredicted RBP15.13■□□□□ 0.01
VARS2-209ENST00000477288 MBD3L2Q8NHZ7 208 aaPredicted RBP15.13■□□□□ 0.01
VARS2-209ENST00000477288 AGMATQ9BSE5 352 aa15.13■□□□□ 0.01
VARS2-209ENST00000477288 OVOL3O00110 214 aa15.13■□□□□ 0.01
VARS2-209ENST00000477288 C5orf24Q7Z6I8 188 aa15.13■□□□□ 0.01
VARS2-209ENST00000477288 Q96MF0 132 aa15.13■□□□□ 0.01
VARS2-209ENST00000477288 F5H768 121 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 CGB3P0DN86 165 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 MST1P26927 711 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 SIGLEC9Q9Y336 463 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 DEFB131AP59861 70 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 NUP35Q8NFH5 326 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 KNCNA6PVL3 124 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 PRR30Q53SZ7 412 aaPredicted RBP15.12■□□□□ 0.01
VARS2-209ENST00000477288 TMEM126AQ9H061 195 aa15.12■□□□□ 0.01
VARS2-209ENST00000477288 GPR179Q6PRD1 2367 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 SCN5AQ14524 2016 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 GATA4P43694 442 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 ARHGEF17Q96PE2 2063 aaPredicted RBP15.11■□□□□ 0.01
VARS2-209ENST00000477288 ZNF561-AS1K7EIQ3 104 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 DNAJC30Q96LL9 226 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 GFI1Q99684 422 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 RALGAPA1Q6GYQ0 2036 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 SNHG12Q9BXW3 62 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 LOC105371267A0A1B0GV96 52 aa15.11■□□□□ 0.01
VARS2-209ENST00000477288 MSMBP08118 114 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 MCRIP2Q9BUT9 160 aaKnown RBP15.1■□□□□ 0.01
VARS2-209ENST00000477288 IGHV3-16A0A0C4DH30 117 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 DKK1O94907 266 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 LINC01559Q495D7 138 aa15.1■□□□□ 0.01
VARS2-209ENST00000477288 RFNGQ9Y644 331 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms