RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 E7EUB6 86 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 CRXO43186 299 aaPredicted RBP6.74□□□□□ -1.33
VAPB-205ENST00000476395 MPDU1O75352 247 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 TRIB1Q96RU8 372 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 PLEKHA3Q9HB20 300 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 ZNF71Q9NQZ8 489 aaPredicted RBP6.74□□□□□ -1.33
VAPB-205ENST00000476395 FOXA2Q9Y261 457 aaPredicted RBP6.74□□□□□ -1.33
VAPB-205ENST00000476395 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 IGF2RP11717 2491 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 RP1L1Q8IWN7 2480 aaPredicted RBP6.74□□□□□ -1.33
VAPB-205ENST00000476395 A0A1W2PRX2 142 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 KLF5Q13887 457 aaPredicted RBP6.74□□□□□ -1.33
VAPB-205ENST00000476395 BPIFA4PQ86YQ2 179 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 C1orf43Q9BWL3 253 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 OR51B2Q9Y5P1 312 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 NAV3Q8IVL0 2385 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 CGB1A6NKQ9 187 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 B5MCH6 92 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 H3BTX0 84 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 PF4P02776 101 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 ATP5G2Q06055 141 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 IGFL2Q6UWQ7 119 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 PGLYRP4Q96LB8 373 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 NABP2Q9BQ15 211 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 SLC25A15Q9Y619 301 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 LY96Q9Y6Y9 160 aa6.74□□□□□ -1.33
VAPB-205ENST00000476395 TPRP12270 2363 aaKnown RBP6.74□□□□□ -1.33
VAPB-205ENST00000476395 ACACAQ13085 2346 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 FGF6P10767 208 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 GATA3P23771 443 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 FCGR2BP31994 310 aaPredicted RBP6.73□□□□□ -1.33
VAPB-205ENST00000476395 INSL3P51460 131 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 TEPPQ6URK8 271 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 APC2O95996 2303 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 LRBAP50851 2863 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 LOXL1Q08397 574 aaPredicted RBP6.73□□□□□ -1.33
VAPB-205ENST00000476395 MRGPRG-AS1Q2M3A8 158 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 VPS13CQ709C8 3753 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 SH2D6Q7Z4S9 175 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 RPRMLQ8N4K4 120 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 FDCSPQ8NFU4 85 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 OR9G1Q8NH87 305 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 GTSF1Q8WW33 167 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 C19orf24Q9BVV8 132 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 LINC00574Q9H8X3 128 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 ENY2Q9NPA8 101 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 ICE1Q9Y2F5 2266 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 J3QR06 171 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 OVOL3O00110 214 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 TIMM8AO60220 97 aaPredicted RBP6.73□□□□□ -1.33
VAPB-205ENST00000476395 COX8AP10176 69 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 OR4A16Q8NH70 328 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 H1FXQ92522 213 aaKnown RBP6.73□□□□□ -1.33
VAPB-205ENST00000476395 C1RLQ9NZP8 487 aa6.73□□□□□ -1.33
VAPB-205ENST00000476395 PIEZO1Q92508 2521 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 NKX2-8O15522 239 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 FTH1P19P0C7X4 201 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 CALYQ9NYX4 217 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 JKAMPQ9P055 326 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 VPREB3Q9UKI3 123 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 RALYQ9UKM9 306 aaKnown RBP6.72□□□□□ -1.33
VAPB-205ENST00000476395 PLXNB1O43157 2135 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 CT45A6P0DMU7 189 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 CT45A5P0DMU8 189 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 CT45A7P0DMV0 189 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 C7orf69Q9H7B7 122 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 FNDC10F2Z333 226 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 SPINT2O43291 252 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 NBL1P41271 181 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 HSD52Q0P140 79 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 WFDC2Q14508 124 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
VAPB-205ENST00000476395 CADP27708 2225 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 A0A1W2PPM0 123 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 MGST3O14880 152 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 OR2J3O76001 311 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 CNEP1R1Q8N9A8 125 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 SLC25A2Q9BXI2 301 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 MAP1LC3CQ9BXW4 147 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 INSIG2Q9Y5U4 225 aa6.71□□□□□ -1.33
VAPB-205ENST00000476395 ANKRD11Q6UB99 2663 aaPredicted RBP6.71□□□□□ -1.34
VAPB-205ENST00000476395 A0A1B0GXF2 115 aa6.71□□□□□ -1.34
VAPB-205ENST00000476395 ZNF474Q6S9Z5 364 aaPredicted RBP6.71□□□□□ -1.34
VAPB-205ENST00000476395 SIGLEC15Q6ZMC9 328 aa6.71□□□□□ -1.34
VAPB-205ENST00000476395 OR8A1Q8NGG7 326 aa6.71□□□□□ -1.34
VAPB-205ENST00000476395 WIPF2Q8TF74 440 aaPredicted RBP6.71□□□□□ -1.34
VAPB-205ENST00000476395 GAFA1Q96PS6 74 aa6.71□□□□□ -1.34
VAPB-205ENST00000476395 MRPL36Q9P0J6 103 aaKnown RBP6.71□□□□□ -1.34
VAPB-205ENST00000476395 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
VAPB-205ENST00000476395 F5H768 121 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms