RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ELOVL1Q9BW60 279 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 EIF5A2Q9GZV4 153 aaKnown RBP5.43□□□□□ -1.54
SHQ1-207ENST00000475558 OR51M1Q9H341 326 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 SERTAD4Q9NUC0 356 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 VAX2Q9UIW0 290 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 UFC1Q9Y3C8 167 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 A0A1W2PRE2 83 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 MFSD2BA6NFX1 497 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 OR2T8A6NH00 312 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 SH2D7A6NKC9 451 aaPredicted RBP5.42□□□□□ -1.54
SHQ1-207ENST00000475558 LGALS9O00182 355 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 PDE6DO43924 150 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 IL4P05112 153 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 LGALS1P09382 135 aaKnown RBP5.42□□□□□ -1.54
SHQ1-207ENST00000475558 HIST1H1EP10412 219 aaKnown RBP5.42□□□□□ -1.54
SHQ1-207ENST00000475558 GPR183P32249 361 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 PROK1P58294 105 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 BEAN1Q3B7T3 259 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 FAM74A3Q4VXF1 159 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 Q6ZS46 218 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 COMMD7Q86VX2 200 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 OR4F17Q8NGA8 305 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 DPF1Q92782 380 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 UHRF2Q96PU4 802 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 OR4F4Q96R69 305 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 SHANK2-AS3Q9BTD1 123 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 SLC25A39Q9BZJ4 359 aaPredicted RBP5.42□□□□□ -1.54
SHQ1-207ENST00000475558 SLC35B3Q9H1N7 401 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 GNB4Q9HAV0 340 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 SEPSECSQ9HD40 501 aaKnown RBP5.42□□□□□ -1.54
SHQ1-207ENST00000475558 LINC00527Q9UJ94 153 aa5.42□□□□□ -1.54
SHQ1-207ENST00000475558 PUS1Q9Y606 427 aaKnown RBP eCLIP5.42□□□□□ -1.54
SHQ1-207ENST00000475558 PLXNB1O43157 2135 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 IGHV3-21A0A0B4J1V1 117 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 FBLL1A6NHQ2 334 aaKnown RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 TMEM250H0YL14 139 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 GHRHP01286 108 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 CRYBB3P26998 211 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 ADMP35318 185 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 GALR1P47211 349 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 LYZP61626 148 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 PSG9Q00887 426 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 PDE6HQ13956 83 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 KIAA0141Q14154 515 aaPredicted RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF506Q5JVG8 444 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 KPRPQ5T749 579 aaPredicted RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 TOMM20LQ6UXN7 152 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF329Q86UD4 541 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 RXFP4Q8TDU9 374 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 C4orf3Q8WVX3 66 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 PAXXQ9BUH6 204 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 KLK15Q9H2R5 256 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 TREM1Q9NP99 234 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 MRPL36Q9P0J6 103 aaKnown RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 TSSC4Q9Y5U2 329 aaPredicted RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
SHQ1-207ENST00000475558 KMT2CQ8NEZ4 4911 aaKnown RBP5.41□□□□□ -1.54
SHQ1-207ENST00000475558 TET2Q6N021 2002 aaPredicted RBP5.4□□□□□ -1.54
SHQ1-207ENST00000475558 SERTM2A0A1B0GWG4 89 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 HELTA6NFD8 242 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF98A6NK75 572 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 G3V4G9 280 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 OR7C2O60412 319 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF253O75346 499 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 NBEAP1P0C6P0 100 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 BCL2P10415 239 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 GATA2P23769 480 aaPredicted RBP5.4□□□□□ -1.54
SHQ1-207ENST00000475558 GCHFRP30047 84 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF726P1Q15940 193 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 RPEL1Q2QD12 228 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 PATE2Q6UY27 113 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 OR8I2Q8N0Y5 310 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 CCDC140Q96MF4 163 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 SEC11CQ9BY50 192 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 GNG13Q9P2W3 67 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 PEMTQ9UBM1 199 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 PRELID1Q9Y255 219 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 U3KQE9 123 aa5.4□□□□□ -1.54
SHQ1-207ENST00000475558 TMEM218A2RU14 115 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 LINC01619G3V211 115 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 H3BRN7 92 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 K7EQM0 130 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 BUB3O43684 328 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 RPLP1P05386 114 aaKnown RBP5.39□□□□□ -1.55
SHQ1-207ENST00000475558 CSN1S1P47710 185 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 CMC4P56277 68 aaPredicted RBP5.39□□□□□ -1.55
SHQ1-207ENST00000475558 MEF2BQ02080 365 aaPredicted RBP5.39□□□□□ -1.55
SHQ1-207ENST00000475558 SOHLH1Q5JUK2 328 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 C19orf35Q6ZS72 473 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 MIR17HGQ75NE6 70 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 IQCF2Q8IXL9 164 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 SLC7A5P1Q8MH63 180 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 OR1N2Q8NGR9 330 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 MRAPQ8TCY5 172 aa5.39□□□□□ -1.55
SHQ1-207ENST00000475558 WIPF2Q8TF74 440 aaPredicted RBP5.39□□□□□ -1.55
SHQ1-207ENST00000475558 HIST1H2BAQ96A08 127 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms