RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.88□□□□□ -0.51
CPSF3-203ENST00000475482 F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
CPSF3-203ENST00000475482 BMPR1BO00238 502 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 NHLRC4P0CG21 123 aaPredicted RBP11.88□□□□□ -0.51
CPSF3-203ENST00000475482 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 LYZP61626 148 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 DEFA5Q01523 94 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 PEA15Q15121 130 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 RNF125Q96EQ8 232 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 CCDC140Q96MF4 163 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
CPSF3-203ENST00000475482 ANKRD34BA5PLL1 514 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 IL4P05112 153 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 S100A1P23297 94 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 ARL3P36405 182 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
CPSF3-203ENST00000475482 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
CPSF3-203ENST00000475482 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 DOK5Q9P104 306 aa11.87□□□□□ -0.51
CPSF3-203ENST00000475482 PEF1Q9UBV8 284 aaKnown RBP11.87□□□□□ -0.51
CPSF3-203ENST00000475482 HUWE1Q7Z6Z7 4374 aaKnown RBP11.87□□□□□ -0.51
CPSF3-203ENST00000475482 A0A1B0GV50 99 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 ATP6V1G1O75348 118 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 TRBV12-3P01733 135 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
CPSF3-203ENST00000475482 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 SMAD5-AS1Q9Y6J3 95 aa11.86□□□□□ -0.51
CPSF3-203ENST00000475482 RBFOX3A6NFN3 312 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
CPSF3-203ENST00000475482 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 GP9P14770 177 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 ADMP35318 185 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 GUK1Q16774 197 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 OR9G4Q8NGQ1 327 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 ELOVL1Q9BW60 279 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 SIGLEC8Q9NYZ4 499 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 MRPL27Q9P0M9 148 aaKnown RBP11.85□□□□□ -0.51
CPSF3-203ENST00000475482 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
CPSF3-203ENST00000475482 PUS1Q9Y606 427 aaKnown RBP eCLIP11.85□□□□□ -0.51
CPSF3-203ENST00000475482 OR7C2O60412 319 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
CPSF3-203ENST00000475482 CCL20P78556 96 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 PATE2Q6UY27 113 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 TXNDC17Q9BRA2 123 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 TREM1Q9NP99 234 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 RABAC1Q9UI14 185 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 VAX2Q9UIW0 290 aa11.84□□□□□ -0.51
CPSF3-203ENST00000475482 KMT2CQ8NEZ4 4911 aaKnown RBP11.83□□□□□ -0.52
CPSF3-203ENST00000475482 KRBOX1C9JBD0 128 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 NDUFA4O00483 81 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 BCL2P10415 239 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 GCHFRP30047 84 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 NARS2Q96I59 477 aaKnown RBP11.83□□□□□ -0.52
CPSF3-203ENST00000475482 WWC2-AS2Q96NR7 200 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 UHRF2Q96PU4 802 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 SLC25A39Q9BZJ4 359 aaPredicted RBP11.83□□□□□ -0.52
CPSF3-203ENST00000475482 ARL2-SNX15V9GYD0 113 aa11.83□□□□□ -0.52
CPSF3-203ENST00000475482 NDUFS6O75380 124 aaKnown RBP11.82□□□□□ -0.52
CPSF3-203ENST00000475482 CD5P06127 495 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 CSN3P07498 182 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 HAGHQ16775 308 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 ZNF506Q5JVG8 444 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 TOMM20LQ6UXN7 152 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 Q8N1Y9 231 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 SUN5Q8TC36 379 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 METTL26Q96S19 204 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 PAXXQ9BUH6 204 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 U3KQK5 164 aa11.82□□□□□ -0.52
CPSF3-203ENST00000475482 LOC102723971A0A1B0GUV8 181 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 H3BRN7 92 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 UBE2L3P68036 154 aaKnown RBP11.81□□□□□ -0.52
CPSF3-203ENST00000475482 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
CPSF3-203ENST00000475482 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 BPIFA4PQ86YQ2 179 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 SLC25A2Q9BXI2 301 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 NKX6-2Q9C056 277 aaPredicted RBP11.81□□□□□ -0.52
CPSF3-203ENST00000475482 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
CPSF3-203ENST00000475482 A8MZ25 164 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 NPPCP23582 126 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
CPSF3-203ENST00000475482 RPEL1Q2QD12 228 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 TMEM190Q8WZ59 177 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 FAM167A-AS1Q96KT0 104 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms