RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 C20orf78Q9BR46 151 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 VCX2Q9H322 139 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 GEMIN7Q9H840 131 aaKnown RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 TUBG2Q9NRH3 451 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 PRNDQ9UKY0 176 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 F5H5K5 113 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 NXPH4O95158 308 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 IGKV3-15P01624 115 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 HSPE1P61604 102 aaKnown RBP3.19□□□□□ -1.9
USP16-205ENST00000474835 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
USP16-205ENST00000474835 C12orf74Q32Q52 190 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 FAM104BQ5XKR9 115 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 ZADH2Q8N4Q0 377 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 LINC00311Q8N616 119 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 ZNF491Q8N8L2 437 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 OR2T6Q8NHC8 308 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 THAP3Q8WTV1 239 aaPredicted RBP3.19□□□□□ -1.9
USP16-205ENST00000474835 SPCS1Q9Y6A9 102 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 LRBAP50851 2863 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 A0A1B0GX51 115 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 H3BUT2 72 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 IGFBP4P22692 258 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 PSG5Q15238 335 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 TEX36Q5VZQ5 186 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 C6orf15Q6UXA7 325 aaPredicted RBP3.19□□□□□ -1.9
USP16-205ENST00000474835 SIGLEC15Q6ZMC9 328 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 OR13A1Q8NGR1 328 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 CITED2Q99967 270 aaPredicted RBP3.19□□□□□ -1.9
USP16-205ENST00000474835 ZNF355PQ9NSJ1 428 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 VPREB3Q9UKI3 123 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 IGKV1D-17A0A075B6S4 117 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 PINLYPA6NC86 204 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 PGPA6NDG6 321 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 GNG7O60262 68 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 CLDN1O95832 211 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 NGFP01138 241 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 TCRAP04437 139 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 P0DMU3 169 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 FAM231AP0DMU4 169 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 FAM231CP0DMU5 169 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 CCL3P10147 92 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 ACP1P24666 158 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 PRSS12P56730 875 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 NXPH1P58417 271 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 BATFQ16520 125 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 RNF151Q2KHN1 245 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 ASPHD1Q5U4P2 390 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 LYPD1Q8N2G4 141 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 LITAFQ99732 161 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 UPK3BQ9BT76 320 aa3.19□□□□□ -1.9
USP16-205ENST00000474835 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 TRAV34A0A0B4J273 112 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 CRYGDP07320 174 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 CELA3AP09093 270 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 DEFB132Q7Z7B7 95 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 IFI27L1Q96BM0 104 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 MAP1LC3CQ9BXW4 147 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 GTSF1LQ9H1H1 148 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 ZNF442Q9H7R0 627 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 PRM3Q9NNZ6 103 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 CABIN1Q9Y6J0 2220 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 A0A0J9YX75 114 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 NTN3O00634 580 aaPredicted RBP3.18□□□□□ -1.9
USP16-205ENST00000474835 SLC31A1O15431 190 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 CD24P25063 80 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 HLA-DMBP28068 263 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 EDDM3BP56851 147 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 ATP5G2Q06055 141 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 TIGITQ495A1 244 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 Q5PR19 223 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 TMEM240Q5SV17 173 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 SIGLEC9Q9Y336 463 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 CACNA1GO43497 2377 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 SEC16AO15027 2179 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 TMEM30CPA0ZSE6 113 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 A1L4Q6 167 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 NPIPA3F8WFD2 350 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 GAGE5Q13069 117 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 GAGE6Q13070 117 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 MSMPQ1L6U9 139 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 FAM201AQ5SY85 155 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 AMTNQ6UX39 209 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 BPIFA4PQ86YQ2 179 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 RNF152Q8N8N0 203 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 NEXN-AS1Q8NBZ9 246 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 TSTD1Q8NFU3 115 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 OR10G6Q8NH81 332 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 TMEM167AQ8TBQ9 72 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 SDK1Q7Z5N4 2213 aa3.18□□□□□ -1.9
USP16-205ENST00000474835 IGLV4-69A0A075B6H9 119 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TRAV5A0A0B4J249 113 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 SRRM5B3KS81 715 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 H3BML4 177 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 WT1-ASQ06250 92 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TEN1Q86WV5 123 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 OR11H6Q8NGC7 330 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 OBSCN-AS1Q96MR7 158 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms