RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ZFAND3Q9H8U3 227 aa13.95□□□□□ -0.18
VARS2-206ENST00000473916 TRBV12-3P01733 135 aa13.94□□□□□ -0.18
VARS2-206ENST00000473916 SLC25A5P05141 298 aaKnown RBP13.94□□□□□ -0.18
VARS2-206ENST00000473916 IGLC2P0DOY2 106 aa13.94□□□□□ -0.18
VARS2-206ENST00000473916 HIST1H1EP10412 219 aaKnown RBP13.94□□□□□ -0.18
VARS2-206ENST00000473916 GNG4P50150 75 aa13.94□□□□□ -0.18
VARS2-206ENST00000473916 RPL15P61313 204 aaKnown RBP13.94□□□□□ -0.18
VARS2-206ENST00000473916 C9orf139Q6ZV77 190 aa13.94□□□□□ -0.18
VARS2-206ENST00000473916 TGOLN2O43493 480 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 IGLV2-8P01709 118 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 Q6YL49 198 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 BPIFA4PQ86YQ2 179 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 SFRP2Q96HF1 295 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 DUX5Q96PT3 197 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 MLXQ9UH92 298 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 AP4M1O00189 453 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 ISLRO14498 428 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 FOLR2P14207 255 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 C10orf99Q6UWK7 81 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 EPDR1Q9UM22 224 aa13.93□□□□□ -0.18
VARS2-206ENST00000473916 HOXA3O43365 443 aaPredicted RBP13.92□□□□□ -0.18
VARS2-206ENST00000473916 IGHV3-11P01762 117 aa13.92□□□□□ -0.18
VARS2-206ENST00000473916 PFN1P07737 140 aaKnown RBP13.92□□□□□ -0.18
VARS2-206ENST00000473916 PF4V1P10720 104 aa13.92□□□□□ -0.18
VARS2-206ENST00000473916 GALR1P47211 349 aa13.92□□□□□ -0.18
VARS2-206ENST00000473916 TEX38Q6PEX7 206 aa13.92□□□□□ -0.18
VARS2-206ENST00000473916 CUBNO60494 3623 aa13.92□□□□□ -0.18
VARS2-206ENST00000473916 TRBV19A0A075B6N1 114 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 FAM223BA6NKX1 122 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 ZNF207O43670 478 aaKnown RBP13.91□□□□□ -0.18
VARS2-206ENST00000473916 FAM223AQ8IWN6 122 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 RABAC1Q9UI14 185 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 VPREB3Q9UKI3 123 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 CLPSL1A2RUU4 121 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 SCGB2A1O75556 95 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 RPS10P46783 165 aaKnown RBP13.91□□□□□ -0.18
VARS2-206ENST00000473916 CFHR3Q02985 330 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 ANAPC16Q96DE5 110 aa13.91□□□□□ -0.18
VARS2-206ENST00000473916 IGHV3OR16-13A0A075B7E8 117 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 IGHV3-74A0A0B4J1X5 117 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 Q71RC1 249 aaPredicted RBP13.9□□□□□ -0.18
VARS2-206ENST00000473916 OR4F17Q8NGA8 305 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 CDC42EP3Q9UKI2 254 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 PRELID1Q9Y255 219 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 IGHV3-49A0A0A0MS15 119 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 BMPR1BO00238 502 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 IGLV1-40P01703 118 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 CNN1P51911 297 aaKnown RBP13.9□□□□□ -0.18
VARS2-206ENST00000473916 FAM3BP58499 235 aaPredicted RBP13.9□□□□□ -0.18
VARS2-206ENST00000473916 OR5R1Q8NH85 324 aa13.9□□□□□ -0.18
VARS2-206ENST00000473916 RNASE7Q9H1E1 156 aaKnown RBP13.9□□□□□ -0.18
VARS2-206ENST00000473916 APOHP02749 345 aaPredicted RBP13.89□□□□□ -0.19
VARS2-206ENST00000473916 MGST1P10620 155 aaKnown RBP13.89□□□□□ -0.19
VARS2-206ENST00000473916 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 C5orf17Q8NAS9 161 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 FAM210BQ96KR6 192 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 OTORQ9NRC9 128 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 SMAD5-AS1Q9Y6J3 95 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 LY96Q9Y6Y9 160 aa13.89□□□□□ -0.19
VARS2-206ENST00000473916 TCRAP04437 139 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 CD99P14209 185 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 OR10G8Q8NGN5 311 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 OR5B12Q96R08 314 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 TRAV8-1A0A0A6YYK1 113 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 A0A1W2PPQ1 181 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 ARL3P36405 182 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 SIGLECL1Q8N7X8 197 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 ATG101Q9BSB4 218 aa13.88□□□□□ -0.19
VARS2-206ENST00000473916 GAR1Q9NY12 217 aaKnown RBP13.88□□□□□ -0.19
VARS2-206ENST00000473916 MYO9AB2RTY4 2548 aa13.87□□□□□ -0.19
VARS2-206ENST00000473916 C1orf196B1AJZ1 125 aa13.87□□□□□ -0.19
VARS2-206ENST00000473916 OR8I2Q8N0Y5 310 aa13.87□□□□□ -0.19
VARS2-206ENST00000473916 ASCL2Q99929 193 aa13.87□□□□□ -0.19
VARS2-206ENST00000473916 TRBV24-1A0A075B6N3 115 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 H3BUA1 57 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 M0R3E3 92 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 GCGP01275 180 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 RAB9AP51151 201 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 TAS2R60P59551 318 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 ERVFC1-1P60608 527 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 TMEM183BQ1AE95 376 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 IGFL4Q6B9Z1 124 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 BAGE2Q86Y30 109 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 FLI1Q01543 452 aaPredicted RBP13.86□□□□□ -0.19
VARS2-206ENST00000473916 UNQ9165/PRO28630Q6UXU0 137 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 GOLT1AQ6ZVE7 132 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 FOXC2Q99958 501 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 TCEAL7Q9BRU2 100 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 PRDM13Q9H4Q3 707 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 ZNF702PQ9H963 129 aa13.86□□□□□ -0.19
VARS2-206ENST00000473916 BRI3O95415 125 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 UBE2G1P62253 170 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 OR4X2Q8NGF9 303 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 PYGO2Q9BRQ0 406 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 KLF12Q9Y4X4 402 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 V9GYV3 84 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms