RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 OR8A1Q8NGG7 326 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 LYZL4Q96KX0 146 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 EDA2RQ9HAV5 297 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 DEPPQ9NTK1 212 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 TRAV8-2A0A0B4J237 113 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 C5orf49A4QMS7 147 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 NPIPB11E5RHQ5 1161 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 WISP2O76076 250 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 UBE2D3P61077 147 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 UBE2D2P62837 147 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 GNG5P63218 68 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 PMVKQ15126 192 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 PIGYQ3MUY2 71 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 ANKRD29Q8N6D5 301 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 ADAMTS9Q9P2N4 1935 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKV1D-43A0A0B4J1Z2 117 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 TRBV7-7A0A0K0K1E9 115 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 LTAP01374 205 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 P0C879 139 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 MORN3Q6PF18 240 aaPredicted RBP4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 Q6ZQT7 251 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 FGFRL1Q8N441 504 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 FAM110DQ8TAY7 271 aaPredicted RBP4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 DEFB118Q96PH6 123 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 LSM7Q9UK45 103 aaKnown RBP4.08□□□□□ -1.76
TMEM39A-206ENST00000473684 ALPK2Q86TB3 2170 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 TMED7-TICAM2A0A0A6YYA0 188 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 TRBV6-6A0A0A6YYG2 114 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 MYMXA0A1B0GTQ4 84 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 SPRY1O43609 319 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 PSMB2P49721 201 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 HOXA4Q00056 320 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 MS4A18Q3C1V0 323 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 PCSK4Q6UW60 755 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 FOXL2NBQ6ZUU3 175 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 PDPNQ86YL7 162 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 SLC37A2Q8TED4 501 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 IFI27L1Q96BM0 104 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 BORCS8Q96FH0 119 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 BMFQ96LC9 184 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 MGST2Q99735 147 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 PCDH15Q96QU1 1955 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKV1-6A0A0C4DH72 117 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 TEX36Q5VZQ5 186 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 DUX4L9Q6RFH8 374 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 LINC01600Q96MT4 127 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 HIST1H4GQ99525 98 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 PLEKHA3Q9HB20 300 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 CHCHD2Q9Y6H1 151 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 COL5A1P20908 1838 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 HCFC1P51610 2035 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 EXPH5Q8NEV8 1989 aa4.07□□□□□ -1.76
TMEM39A-206ENST00000473684 OOSP1A8MZH6 123 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 MS4A18H0YCH9 400 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 ZG16O60844 167 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 NPYP01303 97 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 HBDP02042 147 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF138P52744 262 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 TRPT1Q86TN4 253 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 FAM57AQ8TBR7 257 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 MYOZ3Q8TDC0 251 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 COX14Q96I36 57 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 ODF3Q96PU9 254 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 PRRG4Q9BZD6 226 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 RPP21Q9H633 154 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 PILRAQ9UKJ1 303 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 PRNDQ9UKY0 176 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 TIMM8BQ9Y5J9 83 aaPredicted RBP4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 TRBV7-3A0A075B6L6 115 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 A0A096LNJ9 63 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 TINCRA0A1B0GVN0 87 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 FBXW4P57775 412 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 IGFL4Q6B9Z1 124 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 WDR31Q8NA23 367 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF524Q96C55 264 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 CHCHD5Q9BSY4 110 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 ZNF492Q9P255 531 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 LSM4Q9Y4Z0 139 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 PDE4DIPQ5VU43 2346 aa4.06□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKV1-27A0A075B6S5 117 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 TRAV8-1A0A0A6YYK1 113 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKV1-12A0A0C4DH73 117 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 FAM240AA0A1B0GVK7 77 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 ATP5LO75964 103 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 IGKV1D-12P01611 117 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 CNTFRP26992 372 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 RPL13AP40429 203 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 HSPE1P61604 102 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 OR1C1Q15619 314 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 TIMD4Q96H15 378 aa4.05□□□□□ -1.76
TMEM39A-206ENST00000473684 EPDR1Q9UM22 224 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms