RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PEX7O00628 323 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 ISLRO14498 428 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 HOXA3O43365 443 aaPredicted RBP4.83□□□□□ -1.64
CLK1-210ENST00000473565 MGST1P10620 155 aaKnown RBP4.83□□□□□ -1.64
CLK1-210ENST00000473565 PF4V1P10720 104 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 IER3P46695 156 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 GNG4P50150 75 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 RNASE7Q9H1E1 156 aaKnown RBP4.83□□□□□ -1.64
CLK1-210ENST00000473565 M0R3E3 92 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 FSHBP01225 129 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 IGLV2-8P01709 118 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 APOHP02749 345 aaPredicted RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 FABP1P07148 127 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H1BP16401 226 aaKnown RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 MYCNOSP40205 109 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 GALR1P47211 349 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 ATP5G2Q06055 141 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 HIST2H2BDQ6DRA6 164 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 VN1R17PQ8TDU5 208 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 PITPNC1Q9UKF7 332 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 PPIFP30405 207 aaKnown RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 CYB5R2Q6BCY4 276 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 TEX38Q6PEX7 206 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 STXBP6Q8NFX7 210 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 EEF1AKMT3Q96AZ1 226 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 MBD6Q96DN6 1003 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 SFRP2Q96HF1 295 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 IGF2BP2-AS1Q96M15 143 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 ZFAND3Q9H8U3 227 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 ARL2-SNX15V9GYD0 113 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 MRPS12O15235 138 aaKnown RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 TGOLN2O43493 480 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 CA1P00915 261 aaPredicted RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 IGF1P05019 195 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 PFN1P07737 140 aaKnown RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 IGLC2P0DOY2 106 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H1EP10412 219 aaKnown RBP4.82□□□□□ -1.64
CLK1-210ENST00000473565 HLA-DMBP28068 263 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 PRR27Q6MZM9 219 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 BPIFA4PQ86YQ2 179 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 FAM210BQ96KR6 192 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 EPDR1Q9UM22 224 aa4.82□□□□□ -1.64
CLK1-210ENST00000473565 C1orf196B1AJZ1 125 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 CNN1P51911 297 aaKnown RBP4.81□□□□□ -1.64
CLK1-210ENST00000473565 ERVFC1-1P60608 527 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 OR8I2Q8N0Y5 310 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 CTDSP1Q9GZU7 261 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
CLK1-210ENST00000473565 RABAC1Q9UI14 185 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 TRBV19A0A075B6N1 114 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 CLPSL1A2RUU4 121 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 CXorf65A6NEN9 183 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 C9JCJ5 164 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 AP4M1O00189 453 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 SPINK4O60575 86 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 TRGC2P03986 189 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 FRMD6-AS1P0C7T7 363 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 TCL1AP56279 114 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 UNQ9165/PRO28630Q6UXU0 137 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 GOLT1AQ6ZVE7 132 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 SIGLECL1Q8N7X8 197 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 OR4F17Q8NGA8 305 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 OR10G8Q8NGN5 311 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 TMEM68Q96MH6 324 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 TMEM242Q9NWH2 141 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 TMEM14CQ9P0S9 112 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
CLK1-210ENST00000473565 NDUFS6O75380 124 aaKnown RBP4.8□□□□□ -1.64
CLK1-210ENST00000473565 TSPAN9O75954 239 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 TCRAP04437 139 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 EDN2P20800 178 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 ARL3P36405 182 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 CRIP2P52943 208 aaPredicted RBP4.8□□□□□ -1.64
CLK1-210ENST00000473565 SLC35B1P78383 322 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 Q6YL49 198 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 SIGLEC15Q6ZMC9 328 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 BAGE2Q86Y30 109 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 TXN2Q99757 166 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 VPREB3Q9UKI3 123 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 M0QZK8 103 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 FOLR2P14207 255 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 RAB5BP61020 215 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 UBE2G1P62253 170 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 C5orf17Q8NAS9 161 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 SERTAD4Q9NUC0 356 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 CDC42EP3Q9UKI2 254 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 SETXQ7Z333 2677 aaKnown RBP4.8□□□□□ -1.64
CLK1-210ENST00000473565 TRBV7-1A0A0A6YYK4 115 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 BMPR1BO00238 502 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 SNRPEP62304 92 aaKnown RBP4.8□□□□□ -1.64
CLK1-210ENST00000473565 KLK9Q2XQG4 91 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 PRR31Q5SQ13 230 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 LINC00322Q6ZN03 302 aaPredicted RBP4.8□□□□□ -1.64
CLK1-210ENST00000473565 SMR3AQ99954 134 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 ATG101Q9BSB4 218 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 OTORQ9NRC9 128 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 KLK9Q9UKQ9 250 aa4.8□□□□□ -1.64
CLK1-210ENST00000473565 WNK1Q9H4A3 2382 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms