RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 CST9LQ9H4G1 147 aa11.33□□□□□ -0.59
NHLRC3-204ENST00000473371 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
NHLRC3-204ENST00000473371 SNAI2O43623 268 aa11.33□□□□□ -0.6
NHLRC3-204ENST00000473371 RBP4P02753 201 aa11.33□□□□□ -0.6
NHLRC3-204ENST00000473371 PSG9Q00887 426 aa11.33□□□□□ -0.6
NHLRC3-204ENST00000473371 ZC2HC1AQ96GY0 325 aa11.33□□□□□ -0.6
NHLRC3-204ENST00000473371 TPPP3Q9BW30 176 aa11.33□□□□□ -0.6
NHLRC3-204ENST00000473371 M0R296 226 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 LOXP28300 417 aaPredicted RBP11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 CSN1S1P47710 185 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 VPS25Q9BRG1 176 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 TMEM14CQ9P0S9 112 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 SPENQ96T58 3664 aaKnown RBP11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 IGHV1-8P0DP01 117 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 COX8AP10176 69 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
NHLRC3-204ENST00000473371 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 DLX6P56179 175 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 DEFB123Q8N688 67 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 OR10AG1Q8NH19 301 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 RASL11BQ9BPW5 248 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 TMEM155Q4W5P6 130 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 OCIAD2Q56VL3 154 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 OVOL3O00110 214 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 TMEM133Q9H2Q1 129 aa11.31□□□□□ -0.6
NHLRC3-204ENST00000473371 SPAARA0A1B0GVQ0 90 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 ZNF785A8K8V0 405 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 NCR2O95944 276 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 PRB3Q04118 309 aaPredicted RBP11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 PPBPP02775 128 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 CRYGBP07316 175 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 C2orf91Q6ZV80 131 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 ASCL5Q7RTU5 278 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 DEFB124Q8NES8 71 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 C17orf77Q96MU5 243 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 SCNM1Q9BWG6 230 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 NGBQ9NPG2 151 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 K7EQM0 130 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 DLX1P56177 255 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 FOXE3Q13461 319 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 INSIG2Q9Y5U4 225 aa11.3□□□□□ -0.6
NHLRC3-204ENST00000473371 ZFHX4Q86UP3 3567 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 SERTM2A0A1B0GWG4 89 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 TEX22C9J3V5 150 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 CEACAM4O75871 244 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 LOC389332A0A1B0GUA5 103 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 A0A1B0GW15 77 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 C7orf71A4D174 169 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 TNFRSF13BO14836 293 aaPredicted RBP11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 FTH1P19P0C7X4 201 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 PAX2Q02962 417 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 BSPH1Q075Z2 132 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
NHLRC3-204ENST00000473371 TRBV19A0A075B6N1 114 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 RBPJQ06330 500 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 PKDREJQ9NTG1 2253 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 C16orf97H3BN30 126 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 FAM106CPP0CH98 169 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 PLGLAQ15195 96 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 FAM106AQ4KMX7 169 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 GATD1Q8NB37 220 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 PRSS33Q8NF86 280 aa11.28□□□□□ -0.6
NHLRC3-204ENST00000473371 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.6
NHLRC3-204ENST00000473371 CEP250Q9BV73 2442 aa11.27□□□□□ -0.6
NHLRC3-204ENST00000473371 I3L2K1 104 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 NHLH1Q02575 133 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 PSG3Q16557 428 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 IGHV1-3A0A0C4DH29 117 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 KLK10O43240 276 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 IGKV1-17P01599 117 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 SEC11AP67812 179 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
NHLRC3-204ENST00000473371 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 CRIP1P50238 77 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 Q6AWC8 147 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 SIGLEC15Q6ZMC9 328 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 DYNLRB1Q9NP97 96 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 D6R8Y8 96 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 LOXL1Q08397 574 aaPredicted RBP11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 ASPMQ8IZT6 3477 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms