RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
HIF3A-206ENST00000472815 C11orf52Q96A22 123 aa11.31□□□□□ -0.6
HIF3A-206ENST00000472815 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
HIF3A-206ENST00000472815 FAM181BA6NEQ2 426 aa11.3□□□□□ -0.6
HIF3A-206ENST00000472815 GGCTO75223 188 aaKnown RBP11.3□□□□□ -0.6
HIF3A-206ENST00000472815 NDUFB4O95168 129 aa11.3□□□□□ -0.6
HIF3A-206ENST00000472815 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
HIF3A-206ENST00000472815 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 SCO2A0A1W2PP80 73 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 PPP5D1E7EU14 171 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 SCO1O75880 301 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 IGHV3-11P01762 117 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 NPPCP23582 126 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 PDE6HQ13956 83 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 C1orf194Q5T5A4 169 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 LYPD1Q8N2G4 141 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 SDF2L1Q9HCN8 221 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 RPS10P5Q9NQ39 176 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
HIF3A-206ENST00000472815 RANP62826 216 aaKnown RBP11.29□□□□□ -0.6
HIF3A-206ENST00000472815 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 RNF152Q8N8N0 203 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 HIST1H2BAQ96A08 127 aa11.29□□□□□ -0.6
HIF3A-206ENST00000472815 BTN1A1Q13410 526 aa11.28□□□□□ -0.6
HIF3A-206ENST00000472815 FAM106AQ4KMX7 169 aa11.28□□□□□ -0.6
HIF3A-206ENST00000472815 UBE2E2Q96LR5 201 aa11.28□□□□□ -0.6
HIF3A-206ENST00000472815 C20orf24Q9BUV8 137 aa11.28□□□□□ -0.6
HIF3A-206ENST00000472815 OTORQ9NRC9 128 aa11.28□□□□□ -0.6
HIF3A-206ENST00000472815 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
HIF3A-206ENST00000472815 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 ATF4P18848 351 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-206ENST00000472815 GALR1P47211 349 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 MEOX2P50222 304 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 HILS1P60008 231 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 PSG9Q00887 426 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 CMTM2Q8TAZ6 248 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
HIF3A-206ENST00000472815 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 A0A087WWC5 75 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 A0A1W2PS18 150 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 PGPA6NDG6 321 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 HELTA6NFD8 242 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 C9JCJ5 164 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 SLC25A5P05141 298 aaKnown RBP11.26□□□□□ -0.61
HIF3A-206ENST00000472815 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 CRYBB3P26998 211 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 AKR1C3P42330 323 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 CNN1P51911 297 aaKnown RBP11.26□□□□□ -0.61
HIF3A-206ENST00000472815 ADIRFQ15847 76 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 LCNL1Q6ZST4 164 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 KLHDC1Q8N7A1 406 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 ELOVL1Q9BW60 279 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 Q9H3A6 140 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 SMCO4Q9NRQ5 59 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 BUB3O43684 328 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 RPLP1P05386 114 aaKnown RBP11.26□□□□□ -0.61
HIF3A-206ENST00000472815 S100A9P06702 114 aaKnown RBP11.26□□□□□ -0.61
HIF3A-206ENST00000472815 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
HIF3A-206ENST00000472815 Q6ZSV7 163 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 Q71RC1 249 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-206ENST00000472815 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 ESM1Q9NQ30 184 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 LY96Q9Y6Y9 160 aa11.26□□□□□ -0.61
HIF3A-206ENST00000472815 ANK3Q12955 4377 aaKnown RBP11.25□□□□□ -0.61
HIF3A-206ENST00000472815 IGHV3OR16-8A0A075B7F1 116 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 PEX7O00628 323 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
HIF3A-206ENST00000472815 ZNF253O75346 499 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 TRBV12-3P01733 135 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 BMI1P35226 326 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 MYCNOSP40205 109 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
HIF3A-206ENST00000472815 TAS2R60P59551 318 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 EPDR1Q9UM22 224 aa11.25□□□□□ -0.61
HIF3A-206ENST00000472815 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 K7EQM0 130 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 MT-ND4LP03901 98 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 GNG4P50150 75 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 MTORP42345 2549 aa11.24□□□□□ -0.61
HIF3A-206ENST00000472815 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
HIF3A-206ENST00000472815 UBE2G1P62253 170 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 RPL23P62829 140 aaKnown RBP11.23□□□□□ -0.61
HIF3A-206ENST00000472815 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
HIF3A-206ENST00000472815 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms