RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SNRPGP15A8MWD9 76 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 B3GALNT1O75752 331 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 ATP5G1P05496 136 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 HOXA5P20719 270 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 GPX4P36969 197 aaPredicted RBP6.42□□□□□ -1.38
VCL-204ENST00000472585 ATP5G3P48201 142 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 ICAM4Q14773 271 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 STEAP1BQ6NZ63 245 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
VCL-204ENST00000472585 LYZL2Q7Z4W2 148 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 OR8I2Q8N0Y5 310 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 LGI3Q8N145 548 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 DTD1Q8TEA8 209 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 ZNF503Q96F45 646 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 C16orf92Q96LL3 132 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 FUNDC2Q9BWH2 189 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 SLC25A39Q9BZJ4 359 aaPredicted RBP6.42□□□□□ -1.38
VCL-204ENST00000472585 MIXL1Q9H2W2 232 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 U3KQ87 197 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 ZNF98A6NK75 572 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 PRSS46E5RG02 174 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 SULT1A3P0DMM9 295 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 SULT1A4P0DMN0 295 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 TBPP20226 339 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 GPR107Q5VW38 600 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 THAP8Q8NA92 274 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 TRGV9Q99603 122 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 NAA50Q9GZZ1 169 aaKnown RBP6.41□□□□□ -1.38
VCL-204ENST00000472585 SLC25A22Q9H936 323 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 EXTL2Q9UBQ6 330 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 TNFRSF18Q9Y5U5 241 aa6.41□□□□□ -1.38
VCL-204ENST00000472585 TRAV26-1A0A087WT03 109 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 A0A0J9YY99 117 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 FAM25AB3EWG3 89 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 FAM25CB3EWG5 89 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 FAM25GB3EWG6 89 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 INSP01308 110 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 NUP62P37198 522 aaPredicted RBP6.4□□□□□ -1.38
VCL-204ENST00000472585 TAS2R19P59542 299 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 ERVFC1-1P60608 527 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 NOXA1Q86UR1 476 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 LINC00612Q8N6U2 182 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 OR4C16Q8NGL9 310 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 RNASE8Q8TDE3 154 aaKnown RBP6.4□□□□□ -1.38
VCL-204ENST00000472585 PPP1R14BQ96C90 147 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 LINC01587Q99440 93 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 Q9H521 79 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 NOP10Q9NPE3 64 aaKnown RBP6.4□□□□□ -1.38
VCL-204ENST00000472585 ZNF586Q9NXT0 402 aa6.4□□□□□ -1.38
VCL-204ENST00000472585 ZNF701M0R085 212 aaPredicted RBP6.39□□□□□ -1.39
VCL-204ENST00000472585 PITX3O75364 302 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 HTN1P15515 57 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 VAMP1P23763 118 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 CCR6P51684 374 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 TAS2R60P59551 318 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 KRTAP10-1P60331 282 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 OR5I1Q13606 314 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 SMCO1Q147U7 214 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 CTF1Q16619 201 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 GPR141Q7Z602 305 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 RXFP4Q8TDU9 374 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 IL22RA2Q969J5 263 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 SLC35E1Q96K37 410 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 UPK3BQ9BT76 320 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
VCL-204ENST00000472585 C14orf166Q9Y224 244 aaKnown RBP6.39□□□□□ -1.39
VCL-204ENST00000472585 BOLA2-SMG1P6H3BVE0 249 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 CTDSP2O14595 271 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 DUSP14O95147 198 aaKnown RBP6.38□□□□□ -1.39
VCL-204ENST00000472585 TNFAIP8O95379 198 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 IAPPP10997 89 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 ORM2P19652 201 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 CXCL3P19876 107 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 GALR1P47211 349 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 MEOX2P50222 304 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 LINC00315P59091 139 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 SURF2Q15527 256 aaPredicted RBP6.38□□□□□ -1.39
VCL-204ENST00000472585 OR51S1Q8NGJ8 323 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 OR4D5Q8NGN0 318 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 GNPNAT1Q96EK6 184 aaPredicted RBP6.38□□□□□ -1.39
VCL-204ENST00000472585 VSIG2Q96IQ7 327 aa6.38□□□□□ -1.39
VCL-204ENST00000472585 PARD6GQ9BYG4 376 aaPredicted RBP6.38□□□□□ -1.39
VCL-204ENST00000472585 TIMM8BQ9Y5J9 83 aaPredicted RBP6.38□□□□□ -1.39
VCL-204ENST00000472585 A0A0B4J2A0 478 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 KRTAP29-1A8MX34 341 aaPredicted RBP6.37□□□□□ -1.39
VCL-204ENST00000472585 GABARAPH6UMI1 98 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
VCL-204ENST00000472585 GABARAPO95166 117 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 B2MP61769 119 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 HIST1H1AQ02539 215 aaPredicted RBP6.37□□□□□ -1.39
VCL-204ENST00000472585 FGL1Q08830 312 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 TMEM144Q7Z5S9 345 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 OR8A1Q8NGG7 326 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 OR1B1Q8NGR6 318 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 SHPKQ9UHJ6 478 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 SLC45A2Q9UMX9 530 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 PLA2G2DQ9UNK4 145 aa6.37□□□□□ -1.39
VCL-204ENST00000472585 MRPS16Q9Y3D3 137 aaKnown RBP6.37□□□□□ -1.39
VCL-204ENST00000472585 A0A087WXM4 84 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms