RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 A8MTW9 85 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 PRAC2D3DTV9 90 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 SCGB2A1O75556 95 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 AMBPP02760 352 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 SLC25A6P12236 298 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 ANXA3P12429 323 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 PSMB3P49720 205 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 FGL1Q08830 312 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 SPINK13Q1W4C9 94 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 TMEM41BQ5BJD5 291 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 C1orf194Q5T5A4 169 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 MORN5Q5VZ52 161 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 BAP18Q8IXM2 172 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 OR11H7Q8NGC8 314 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 OR4D5Q8NGN0 318 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 C16orf92Q96LL3 132 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 SLC25A39Q9BZJ4 359 aaPredicted RBP5.71□□□□□ -1.5
USP48-207ENST00000471752 YTHDF2Q9Y5A9 579 aaKnown RBP5.71□□□□□ -1.5
USP48-207ENST00000471752 LOC102723971A0A1B0GUV8 181 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 SMCO3A2RU48 225 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 ISLRO14498 428 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 CCSO14618 274 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 MRPS12O15235 138 aaKnown RBP5.7□□□□□ -1.5
USP48-207ENST00000471752 PLA2G10O15496 165 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 SSSCA1O60232 199 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 METTL15P1P0C7V9 234 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 SPART-AS1P0CW21 52 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 ID1P41134 155 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 CNN1P51911 297 aaKnown RBP5.7□□□□□ -1.5
USP48-207ENST00000471752 ATP5IP56385 69 aaPredicted RBP5.7□□□□□ -1.5
USP48-207ENST00000471752 TCTAP57738 103 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 NUTF2P61970 127 aaKnown RBP5.7□□□□□ -1.5
USP48-207ENST00000471752 RAB11AP62491 216 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 SRPXP78539 464 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 TMEM88Q6PEY1 159 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 CYP2G1PQ6ZSU1 146 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 CENPSQ8N2Z9 138 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 ZBTB8BQ8NAP8 495 aaPredicted RBP5.7□□□□□ -1.5
USP48-207ENST00000471752 COQ8AQ8NI60 647 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 SLC25A21Q9BQT8 299 aaPredicted RBP5.7□□□□□ -1.5
USP48-207ENST00000471752 NDUFAF3Q9BU61 184 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 C1QTNF4Q9BXJ3 329 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 PSENENQ9NZ42 101 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 TMED3Q9Y3Q3 217 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 RFNGQ9Y644 331 aa5.7□□□□□ -1.5
USP48-207ENST00000471752 TRAV5A0A0B4J249 113 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 DUXBA0A1W2PPF3 345 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 H3BRN7 92 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 NDUFB6O95139 128 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 OR4E1P0C645 316 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 AKR1C1Q04828 323 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 SLC38A11Q08AI6 406 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 EBLN2Q6P2I7 272 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 TMEM14EPQ6UXP3 125 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 Q6ZR54 194 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 TMEM144Q7Z5S9 345 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 Q8N3U1 123 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 BPIFCQ8NFQ6 507 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 SMIM8Q96KF7 97 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 CLUHP3Q96NS8 147 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 C7orf50Q9BRJ6 194 aaKnown RBP5.69□□□□□ -1.5
USP48-207ENST00000471752 NIPSNAP3BQ9BS92 247 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 SHANK2-AS3Q9BTD1 123 aa5.69□□□□□ -1.5
USP48-207ENST00000471752 RCL1Q9Y2P8 373 aaKnown RBP5.69□□□□□ -1.5
USP48-207ENST00000471752 STRAPQ9Y3F4 350 aaKnown RBP5.69□□□□□ -1.5
USP48-207ENST00000471752 C7orf66A4D0T2 115 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 PRSS29PA6NIE9 313 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 SLC17A3O00476 420 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 NOL3O60936 208 aaKnown RBP5.68□□□□□ -1.5
USP48-207ENST00000471752 MED6O75586 246 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 SCGB1D2O95969 90 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 MBPP02686 304 aaPredicted RBP5.68□□□□□ -1.5
USP48-207ENST00000471752 IL5P05113 134 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 OR5G3P0C626 314 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 LINC00869P0C866 280 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 DEFB130BP0DP73 79 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 DEFB130AP0DP74 79 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 CXCL3P19876 107 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 FAUP35544 74 aaKnown RBP5.68□□□□□ -1.5
USP48-207ENST00000471752 GALR1P47211 349 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 AP3S2P59780 193 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 TMEM37Q8WXS4 190 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 IGF2BP2-AS1Q96M15 143 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 ARL6Q9H0F7 186 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 RPRMQ9NS64 109 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 GSKIPQ9P0R6 139 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 HERC1Q15751 4861 aa5.68□□□□□ -1.5
USP48-207ENST00000471752 SMIM9A6NGZ8 99 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 H3BQ15 152 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 HYPMO75409 117 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 HBE1P02100 147 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 HTN1P15515 57 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 S100A5P33763 92 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 HIST1H1AQ02539 215 aaPredicted RBP5.67□□□□□ -1.5
USP48-207ENST00000471752 PSG3Q16557 428 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 RRN3P1Q2M238 152 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 IAH1Q2TAA2 248 aaPredicted RBP5.67□□□□□ -1.5
USP48-207ENST00000471752 Q6ZQT7 251 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 ZNF575Q86XF7 245 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 CIB3Q96Q77 187 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms