RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 P01737 135 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 ISG15P05161 165 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 BLVRBP30043 206 aaPredicted RBP3.48□□□□□ -1.85
CKS1B-204ENST00000471245 ZNF137PP52743 207 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 CACNG7P62955 275 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 MED21Q13503 144 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 FLOT2Q14254 428 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 KISS1Q15726 138 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 SYT6Q5T7P8 510 aaPredicted RBP3.48□□□□□ -1.85
CKS1B-204ENST00000471245 LPCAT4Q643R3 524 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 KDM4DQ6B0I6 523 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 ELP2Q6IA86 826 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 SAXO1Q8IYX7 474 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 SLC7A5P1Q8MH63 180 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 CYB561D1Q8N8Q1 229 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 OR10X1Q8NGY0 326 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 OR2T10Q8NGZ9 312 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 RNASEH2CQ8TDP1 164 aaKnown RBP3.48□□□□□ -1.85
CKS1B-204ENST00000471245 TMEM106AQ96A25 262 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 PTX4Q96A99 478 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 IFT46Q9NQC8 304 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 GNG8Q9UK08 70 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 ARL2BPQ9Y2Y0 163 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 KLK5Q9Y337 293 aaPredicted RBP3.48□□□□□ -1.85
CKS1B-204ENST00000471245 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 IZUMO1RA6ND01 250 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 H0Y980 276 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 GNGT2O14610 69 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 GEMIN2O14893 280 aaKnown RBP3.47□□□□□ -1.85
CKS1B-204ENST00000471245 YIF1AO95070 293 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 CNIH1O95406 144 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 CDC34P49427 236 aaPredicted RBP3.47□□□□□ -1.85
CKS1B-204ENST00000471245 CDNFQ49AH0 187 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 TMEM244Q5VVB8 128 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 GID4Q8IVV7 300 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 DEFB125Q8N687 156 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 UBAC2Q8NBM4 344 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 PXT1Q8NFP0 134 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 OR1L1Q8NH94 360 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 ARL11Q969Q4 196 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 FLYWCH2Q96CP2 140 aaKnown RBP3.47□□□□□ -1.85
CKS1B-204ENST00000471245 HSD17B10Q99714 261 aaKnown RBP3.47□□□□□ -1.85
CKS1B-204ENST00000471245 THTPAQ9BU02 230 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 WFDC10AQ9H1F0 79 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 RHOFQ9HBH0 211 aa3.47□□□□□ -1.85
CKS1B-204ENST00000471245 TRAV41A0A0B4J266 112 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 SDCBPO00560 298 aaPredicted RBP3.46□□□□□ -1.86
CKS1B-204ENST00000471245 TAAR5O14804 337 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 PSPHP1O15172 72 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 CDRT1O95170 752 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 IGHV3-11P01762 117 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 HLA-DRB1P01911 266 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 MT-ND4P03905 459 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 CD7P09564 240 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 RBM11P57052 281 aaKnown RBP3.46□□□□□ -1.86
CKS1B-204ENST00000471245 ACTBP60709 375 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 SYCNQ0VAF6 134 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 TRAM1Q15629 374 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 RGS21Q2M5E4 152 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 ZFP2Q6ZN57 461 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 LFNGQ8NES3 379 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 COQ8AQ8NI60 647 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 DNAJC9Q8WXX5 260 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 SDHCQ99643 169 aaPredicted RBP3.46□□□□□ -1.86
CKS1B-204ENST00000471245 NDFIP1Q9BT67 221 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 MRPL20Q9BYC9 149 aaKnown RBP3.46□□□□□ -1.86
CKS1B-204ENST00000471245 GABARAPL1Q9H0R8 117 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 PARP11Q9NR21 331 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 KLK12Q9UKR0 248 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 POMPQ9Y244 141 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 CBY1Q9Y3M2 126 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 NUBP2Q9Y5Y2 271 aa3.46□□□□□ -1.86
CKS1B-204ENST00000471245 TMEM223A0PJW6 202 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 TMEM30CPA0ZSE6 113 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 OR11H12B2RN74 326 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 J3QLW9 94 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 BPY2O14599 106 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 SULT1B1O43704 296 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 ADAP1O75689 374 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 DCTN3O75935 186 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 SLC22A5O76082 557 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 OR7C1O76099 320 aaPredicted RBP3.45□□□□□ -1.86
CKS1B-204ENST00000471245 NDUFA3O95167 84 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 TRBV12-3P01733 135 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 HBZP02008 142 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 ORM1P02763 201 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 HTR1AP08908 422 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 GZMHP20718 246 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 GTF2A1P52655 376 aaPredicted RBP3.45□□□□□ -1.86
CKS1B-204ENST00000471245 GNGT1P63211 74 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 DEFA5Q01523 94 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 TNFRSF9Q07011 255 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 RAB31Q13636 194 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 MMDQ15546 238 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 PRSS8Q16651 343 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 SMUG1Q53HV7 270 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 OR10J3Q5JRS4 329 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 IDNKQ5T6J7 187 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms