RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 FAM159AQ6UWV7 190 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 PRNTQ86SH4 94 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 PHLDA1Q8WV24 401 aaPredicted RBP3.41□□□□□ -1.86
VPS50-210ENST00000471188 PPDPFLQ8WWR9 84 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 DLX4Q92988 240 aaPredicted RBP3.41□□□□□ -1.86
VPS50-210ENST00000471188 FANCD2OSQ96PS1 177 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 PRDM14Q9GZV8 571 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 EPDR1Q9UM22 224 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 ICE1Q9Y2F5 2266 aa3.41□□□□□ -1.86
VPS50-210ENST00000471188 DNAJC13O75165 2243 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 IGKV1OR2-108A0A075B7D4 117 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 A0A1W2PQM1 296 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 OOEPA6NGQ2 149 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 C16orf97H3BN30 126 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 PSPNO60542 156 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 IFITM1P13164 125 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 EVI2AP22794 236 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 CIARTQ8N365 385 aaPredicted RBP3.4□□□□□ -1.86
VPS50-210ENST00000471188 DEFB119Q8N690 84 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 ZNF296Q8WUU4 475 aaPredicted RBP3.4□□□□□ -1.86
VPS50-210ENST00000471188 RAX2Q96IS3 184 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 ASCL2Q99929 193 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 DCTN5Q9BTE1 182 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 MAP1LC3AQ9H492 121 aa3.4□□□□□ -1.86
VPS50-210ENST00000471188 TNFRSF13BO14836 293 aaPredicted RBP3.4□□□□□ -1.87
VPS50-210ENST00000471188 HOXA3O43365 443 aaPredicted RBP3.4□□□□□ -1.87
VPS50-210ENST00000471188 RBP4P02753 201 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 DUTP33316 252 aaKnown RBP3.4□□□□□ -1.87
VPS50-210ENST00000471188 SSR4P51571 173 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 HSPE1P61604 102 aaKnown RBP3.4□□□□□ -1.87
VPS50-210ENST00000471188 CCL7P80098 99 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 PLGLB1Q02325 96 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 DIAPH2-AS1Q14236 149 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 ZNF766Q5HY98 468 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 C1orf210Q8IVY1 113 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 WDR31Q8NA23 367 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 FOXC2Q99958 501 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 SLC25A2Q9BXI2 301 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 PKIBQ9C010 78 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 RAB1BQ9H0U4 201 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 FBXL15Q9H469 300 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 UBTD1Q9HAC8 227 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 PRO0461Q9UI25 63 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 ADAMTS20P59510 1910 aa3.4□□□□□ -1.87
VPS50-210ENST00000471188 SPTY2D1-AS1A0A0U1RR47 76 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 A0A1W2PQF6 199 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 FAM90A9PA6NNJ1 464 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 TMEM262E9PQX1 116 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 SMKR1H3BMG3 65 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 NDUFS7O75251 213 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 MRPL33O75394 65 aaKnown RBP3.39□□□□□ -1.87
VPS50-210ENST00000471188 IGKCP01834 107 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ZNF688P0C7X2 276 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 NHLRC4P0CG21 123 aaPredicted RBP3.39□□□□□ -1.87
VPS50-210ENST00000471188 KLF17Q5JT82 389 aaPredicted RBP3.39□□□□□ -1.87
VPS50-210ENST00000471188 AMN1Q8IY45 258 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 Q8TCH9 128 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 COQ2Q96H96 371 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 RTL8AQ9BWD3 113 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 MRPL32Q9BYC8 188 aaKnown RBP3.39□□□□□ -1.87
VPS50-210ENST00000471188 PROK2Q9HC23 129 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 HIGD1BQ9P298 99 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 VPREB3Q9UKI3 123 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 A0A096LNJ9 63 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 LINC01549A6NIU2 74 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 A8MWV9 139 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 WNT9BO14905 357 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 CKS2P33552 79 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 KIR2DL1P43626 348 aaPredicted RBP3.39□□□□□ -1.87
VPS50-210ENST00000471188 CFAP126Q5VTH2 177 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ZNF826PQ6ZT77 177 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 LINC00305Q7Z4B0 112 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 MOGAT3Q86VF5 341 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 OR13A1Q8NGR1 328 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 RPEQ96AT9 228 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 FAM167A-AS1Q96KT0 104 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 PLA2G2FQ9BZM2 168 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 RAB9BQ9NP90 201 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 OCIAD1Q9NX40 245 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 NAV3Q8IVL0 2385 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 TRAV4A0A0B4J268 109 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 LINC01548A6NM66 108 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 C15orf61A6NNL5 157 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 CCL3P10147 92 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ALKBH6Q3KRA9 238 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ABHD17BQ5VST6 288 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 PPP1R27Q86WC6 154 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 TEN1Q86WV5 123 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ORMDL3Q8N138 153 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 OR1L4Q8NGR5 311 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ATP6V0E2Q8NHE4 81 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 ITLN1Q8WWA0 313 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 NPIPB3Q92617 1050 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 LEAP2Q969E1 77 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 VCX2Q9H322 139 aa3.39□□□□□ -1.87
VPS50-210ENST00000471188 FRYLO94915 3013 aa3.38□□□□□ -1.87
VPS50-210ENST00000471188 CEP290O15078 2479 aa3.38□□□□□ -1.87
VPS50-210ENST00000471188 TRAV40A0A0B4J280 105 aa3.38□□□□□ -1.87
VPS50-210ENST00000471188 TMEM8BA6NDV4 472 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms