RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RPL27AP46776 148 aaKnown RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 DYNLT3P51808 116 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RAG2P55895 527 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 TAS2R31P59538 309 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 S100A10P60903 97 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RRAS2P62070 204 aaPredicted RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RPL8P62917 257 aaKnown RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 IL15RAQ13261 267 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 MSMO1Q15800 293 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 POU2AF1Q16633 256 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 IAH1Q2TAA2 248 aaPredicted RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 VMA21Q3ZAQ7 101 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 LPCAT3Q6P1A2 487 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 UNQ5815/PRO19632Q6UWF5 114 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 SLC35E3Q7Z769 313 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 OR4D5Q8NGN0 318 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 OR1S1Q8NH92 325 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 COQ8AQ8NI60 647 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF418Q8TF45 676 aaPredicted RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 ADTRPQ96IZ2 230 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 TSNAXQ99598 290 aaKnown RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 PHB2Q99623 299 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RASL11BQ9BPW5 248 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RNF126Q9BV68 326 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 SMIM3Q9BZL3 60 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 C11orf1Q9H5F2 150 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 NDUFA4L2Q9NRX3 87 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 MBD2Q9UBB5 411 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 SHPKQ9UHJ6 478 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 PAIP2BQ9ULR5 123 aaKnown RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 DNAH3Q8TD57 4116 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 COL6A5A8TX70 2615 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 HUWE1Q7Z6Z7 4374 aaKnown RBP2.75□□□□□ -1.97
COL9A1-206ENST00000470652 IGLV8-61A0A075B6I0 122 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 TRAV41A0A0B4J266 112 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 WI2-2373I1.2A0A1W2PRP0 233 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 BTBD17A6NE02 478 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 CEBPZOSA8MTT3 80 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 SNRPGP15A8MWD9 76 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 PPP5D1E7EU14 171 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 SERF1AO75920 110 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 CST7O76096 145 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 DHFRP00374 187 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 HRASP01112 189 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 IFNA17P01571 189 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 IGHG2P01859 326 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 METTL15P1P0C7V9 234 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 OR13C7P0DN81 318 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 RNASE2P10153 161 aaKnown RBP2.75□□□□□ -1.97
COL9A1-206ENST00000470652 ANXA3P12429 323 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 DEFA4P12838 97 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 VDAC1P21796 283 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 KIR2DS2P43631 304 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 LGALS7P47929 136 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 BCAP31P51572 246 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 RIPPLY3P57055 190 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 TNFRSF9Q07011 255 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 SMCO1Q147U7 214 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 NSUN5P1Q3KNT7 163 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 STPG2Q8N412 459 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 PPP1R1CQ8WVI7 109 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 LSM10Q969L4 123 aaKnown RBP2.75□□□□□ -1.97
COL9A1-206ENST00000470652 PINX1Q96BK5 328 aaKnown RBP2.75□□□□□ -1.97
COL9A1-206ENST00000470652 SCGB3A2Q96PL1 93 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 P2RX4Q99571 388 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF436Q9C0F3 470 aaPredicted RBP2.75□□□□□ -1.97
COL9A1-206ENST00000470652 MED28Q9H204 178 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 WFDC1Q9HC57 220 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF355PQ9NSJ1 428 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM14BQ9NUH8 114 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 COA4Q9NYJ1 87 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 KCNIP3Q9Y2W7 256 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 PKD1L1Q8TDX9 2849 aa2.75□□□□□ -1.97
COL9A1-206ENST00000470652 IGLV11-55A0A075B6I3 123 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 FXYD6-FXYD2A0A087WZ82 144 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 IGHV3-49A0A0A0MS15 119 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 PSMB11A5LHX3 300 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 CLDN34H7C241 214 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 K7EIM0 57 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 FGF16O43320 207 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 ZNF207O43670 478 aaKnown RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 SNAPC5O75971 98 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 MPC2O95563 127 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 TRGV3P03979 118 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 TRAPPC2P0DI81 140 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 TRAPPC2BP0DI82 140 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 CTRB1P17538 263 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 CXCL2P19875 107 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 ZP3P21754 424 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 PSMB6P28072 239 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 S100GP29377 79 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 AP2S1P53680 142 aaPredicted RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 TPPP2P59282 170 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 BPIFB3P59826 476 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 HSPE1P61604 102 aaKnown RBP2.74□□□□□ -1.97
COL9A1-206ENST00000470652 RHOGP84095 191 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 PRCDQ00LT1 54 aa2.74□□□□□ -1.97
COL9A1-206ENST00000470652 AANATQ16613 207 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms