RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TMEM144Q7Z5S9 345 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 S100A7AQ86SG5 101 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 LHFPL1Q86WI0 220 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 SNX29P2Q8IUI4 249 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 OR1B1Q8NGR6 318 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 RXFP4Q8TDU9 374 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 CHAC2Q8WUX2 184 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 SLC35E1Q96K37 410 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 TMEM222Q9H0R3 208 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 SLC45A2Q9UMX9 530 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 C14orf166Q9Y224 244 aaKnown RBP6.15□□□□□ -1.42
XRN1-208ENST00000470537 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.43
XRN1-208ENST00000470537 F6UB75 175 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 SULT1A3P0DMM9 295 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 SULT1A4P0DMN0 295 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 CNN1P51911 297 aaKnown RBP6.14□□□□□ -1.43
XRN1-208ENST00000470537 DEFB1P60022 68 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 ERVFC1-1P60608 527 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 LYZP61626 148 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 NMSQ5H8A3 153 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 GPR107Q5VW38 600 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 NFE4Q86UQ8 179 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 LGI3Q8N145 548 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 GPR146Q96CH1 333 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 CACNG5Q9UF02 275 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 KCNIP3Q9Y2W7 256 aa6.14□□□□□ -1.43
XRN1-208ENST00000470537 NXPH3O95157 252 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 HTN1P15515 57 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 RPS19P39019 145 aaKnown RBP6.13□□□□□ -1.43
XRN1-208ENST00000470537 RAB11AP62491 216 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 RHOBP62745 196 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 DLK1P80370 383 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 SURF2Q15527 256 aaPredicted RBP6.13□□□□□ -1.43
XRN1-208ENST00000470537 SCGB2B2Q4G0G5 96 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 Q5VSD8 79 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 AMTNQ6UX39 209 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 CCDC28AQ8IWP9 274 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 OR11H7Q8NGC8 314 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 GLYATL2Q8WU03 294 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 TRGV9Q99603 122 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 RSG1Q9BU20 258 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 VCX3AQ9NNX9 186 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 COMMD3Q9UBI1 195 aa6.13□□□□□ -1.43
XRN1-208ENST00000470537 MRPS16Q9Y3D3 137 aaKnown RBP6.13□□□□□ -1.43
XRN1-208ENST00000470537 TRAV9-2A0A087WT02 112 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 TRAV26-1A0A087WT03 109 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 A0A0G2JRQ6 117 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 ZNF98A6NK75 572 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 BOLA2-SMG1P6H3BVE0 249 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 H7BYZ3 331 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 M0R2Z0 102 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 CD3DP04234 171 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 OR5AC1P0C628 307 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 TAS2R19P59542 299 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 RPP30P78346 268 aaKnown RBP6.12□□□□□ -1.43
XRN1-208ENST00000470537 ZNF90Q03938 601 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 FCN2Q15485 313 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 NEDD8Q15843 81 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 TMEM268Q5VZI3 342 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 STEAP1BQ6NZ63 245 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 MZT2AQ6P582 158 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 OR13C8Q8NGS7 320 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 DTD1Q8TEA8 209 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 TMEM263Q8WUH6 116 aaKnown RBP6.12□□□□□ -1.43
XRN1-208ENST00000470537 IL22RA2Q969J5 263 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 C18orf15Q96N68 181 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 C20orf144Q9BQM9 153 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 NAA60Q9H7X0 242 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 SLC25A22Q9H936 323 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 ZNF586Q9NXT0 402 aa6.12□□□□□ -1.43
XRN1-208ENST00000470537 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
XRN1-208ENST00000470537 K7EP13 123 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 CRXO43186 299 aaPredicted RBP6.11□□□□□ -1.43
XRN1-208ENST00000470537 RAB3DO95716 219 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 RLN2P04090 185 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 AKR1C4P17516 323 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 AZU1P20160 251 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 CCR6P51684 374 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 MEF2DQ14814 521 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 ESRGQ1W209 222 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 SELENOHQ8IZQ5 122 aaKnown RBP6.11□□□□□ -1.43
XRN1-208ENST00000470537 ZNF738Q8NE65 137 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 BPIFCQ8NFQ6 507 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 LRRC20Q8TCA0 184 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 MARCH1Q8TCQ1 289 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 SCGB3A2Q96PL1 93 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 TMEM147Q9BVK8 224 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 NOP10Q9NPE3 64 aaKnown RBP6.11□□□□□ -1.43
XRN1-208ENST00000470537 HSPB7Q9UBY9 170 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 MTFP1Q9UDX5 166 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 TMEM56-RWDD3S4R434 201 aa6.11□□□□□ -1.43
XRN1-208ENST00000470537 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 SNURFLB1AK76 121 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 FAM25AB3EWG3 89 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 FAM25CB3EWG5 89 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 FAM25GB3EWG6 89 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 ZNF701M0R085 212 aaPredicted RBP6.1□□□□□ -1.43
XRN1-208ENST00000470537 SIVA1O15304 175 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms