RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TFPI2P48307 235 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
SMC1A-206ENST00000470241 SPATA31B1PQ5VZV4 182 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 C9orf62Q8N4C0 152 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 GBGT1Q8N5D6 347 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 OR2G3Q8NGZ4 309 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 GNPNAT1Q96EK6 184 aaPredicted RBP7.9□□□□□ -1.14
SMC1A-206ENST00000470241 MS4A6AQ9H2W1 248 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.14
SMC1A-206ENST00000470241 TRAV2A0A0B4J234 112 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 OR4C46A6NHA9 309 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 MRPS12O15235 138 aaKnown RBP7.89□□□□□ -1.15
SMC1A-206ENST00000470241 PFDN1O60925 122 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 CD7P09564 240 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 FAM78BQ5VT40 261 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 S100A7AQ86SG5 101 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 WFDC3Q8IUB2 231 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 Q8N1Y9 231 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 STXBP6Q8NFX7 210 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 DCANP1Q8TF63 244 aa7.89□□□□□ -1.15
SMC1A-206ENST00000470241 ZNF471Q9BX82 626 aaPredicted RBP7.89□□□□□ -1.15
SMC1A-206ENST00000470241 NOTCH1P46531 2555 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 K7EIL1 84 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 K7EQG2 157 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 DNASE2O00115 360 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-206ENST00000470241 RPL7P18124 248 aaKnown RBP7.88□□□□□ -1.15
SMC1A-206ENST00000470241 M6PRP20645 277 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 GALR1P47211 349 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 NKX2-5P52952 324 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-206ENST00000470241 RAB2AP61019 212 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 PAFAH1B2P68402 229 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 SERF2P84101 59 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 ACOT6Q3I5F7 207 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-206ENST00000470241 MIR17HGQ75NE6 70 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 FAM167A-AS1Q96KT0 104 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 GPR82Q96P67 336 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 SLC25A2Q9BXI2 301 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 MRPL32Q9BYC8 188 aaKnown RBP7.88□□□□□ -1.15
SMC1A-206ENST00000470241 NRN1Q9NPD7 142 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 C19orf73Q9NVV2 129 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 RNF24Q9Y225 148 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 FUT9Q9Y231 359 aa7.88□□□□□ -1.15
SMC1A-206ENST00000470241 SOCS3O14543 225 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMC1A-206ENST00000470241 SPP1P10451 314 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 CD81P60033 236 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 DEFA6Q01524 100 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 ODF3L2Q3SX64 289 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 GTSCR1Q86UQ5 136 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 STOML3Q8TAV4 291 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
SMC1A-206ENST00000470241 A0A087X0K7 114 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 H3BQ15 152 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 MBP02144 154 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 SNRPCP09234 159 aaKnown RBP7.86□□□□□ -1.15
SMC1A-206ENST00000470241 IGLC2P0DOY2 106 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 ATF4P18848 351 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-206ENST00000470241 RHOBP62745 196 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 EIF5AP63241 154 aaKnown RBP7.86□□□□□ -1.15
SMC1A-206ENST00000470241 TMEM41BQ5BJD5 291 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 FAM122CQ6P4D5 195 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 BPIFA4PQ86YQ2 179 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 BAP18Q8IXM2 172 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 RPP25LQ8N5L8 163 aaKnown RBP7.86□□□□□ -1.15
SMC1A-206ENST00000470241 WFDC10AQ9H1F0 79 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 RPRMQ9NS64 109 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 TMEM14CQ9P0S9 112 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 UBQLN2Q9UHD9 624 aa7.86□□□□□ -1.15
SMC1A-206ENST00000470241 TRAV8-2A0A0B4J237 113 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 OR11H12B2RN74 326 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 SEC11BP0C7V7 166 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 PYYP10082 97 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 TPT1P13693 172 aaKnown RBP7.85□□□□□ -1.15
SMC1A-206ENST00000470241 SLC51BQ86UW2 128 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 DEFB125Q8N687 156 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 ZNF503Q96F45 646 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 FAM110AQ9BQ89 295 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 HRH4Q9H3N8 390 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 MAP6D1Q9H9H5 199 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
SMC1A-206ENST00000470241 A0A1W2PPV4 95 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 H3BTX0 84 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 BOLA2-SMG1P6H3BVE0 249 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
SMC1A-206ENST00000470241 ZNF688P0C7X2 276 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.15
SMC1A-206ENST00000470241 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-206ENST00000470241 PSMB3P49720 205 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 MEOX2P50222 304 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 CMC4P56277 68 aaPredicted RBP7.84□□□□□ -1.15
SMC1A-206ENST00000470241 DEFB131AP59861 70 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 ZNF726P1Q15940 193 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 ZNF124Q15973 351 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 IGFL4Q6B9Z1 124 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms