RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
CCDC171-204ENST00000470191 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 SRRM2Q9UQ35 2752 aaKnown RBP6.28□□□□□ -1.4
CCDC171-204ENST00000470191 TEX13DA0A0J9YY54 714 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-204ENST00000470191 A0A1W2PPQ1 181 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 A8MTW9 85 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 SNRPGP15A8MWD9 76 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 GABARAPH6UMI1 98 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 GABARAPO95166 117 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 TNFAIP8O95379 198 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 MEOX2P50222 304 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 B2MP61769 119 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 HIST1H1AQ02539 215 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-204ENST00000470191 GAMTQ14353 236 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM268Q5VZI3 342 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 Q6ZSN1 163 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM144Q7Z5S9 345 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 NOXA1Q86UR1 476 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 LHFPL1Q86WI0 220 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 CROCCP3Q8IVE0 287 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 FAM219AQ8IW50 185 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 OR4D10Q8NGI6 311 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 RBPMSQ93062 196 aaKnown RBP6.27□□□□□ -1.41
CCDC171-204ENST00000470191 C16orf74Q96GX8 76 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM222Q9H0R3 208 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 RBKSQ9H477 322 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
CCDC171-204ENST00000470191 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.41
CCDC171-204ENST00000470191 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 HPGDSO60760 199 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 FABP1P07148 127 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 TAS2R60P59551 318 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 LGI3Q8N145 548 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 DTD1Q8TEA8 209 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 GLYATL2Q8WU03 294 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 RAB26Q9ULW5 256 aa6.26□□□□□ -1.41
CCDC171-204ENST00000470191 C14orf166Q9Y224 244 aaKnown RBP6.26□□□□□ -1.41
CCDC171-204ENST00000470191 TRAV8-2A0A0B4J237 113 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 ZNF98A6NK75 572 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 FAM25AB3EWG3 89 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 FAM25CB3EWG5 89 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 FAM25GB3EWG6 89 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 SIVA1O15304 175 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 CDS2O95674 445 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 SULT1A3P0DMM9 295 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 SULT1A4P0DMN0 295 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 ORM2P19652 201 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-204ENST00000470191 AARDQ4LEZ3 155 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 SAMD13Q5VXD3 122 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 CDPF1Q6NVV7 123 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 FAAP20Q6NZ36 180 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM256Q8N2U0 113 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 OR52I2Q8NH67 350 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 TERB2Q8NHR7 220 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 PARD6GQ9BYG4 376 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-204ENST00000470191 NAA60Q9H7X0 242 aa6.25□□□□□ -1.41
CCDC171-204ENST00000470191 J3KRW8 73 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM127O75204 238 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 ADAP1O75689 374 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 APOA1P02647 267 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 RLN2P04090 185 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 GCSHP23434 173 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 OR1B1Q8NGR6 318 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 RNASE8Q8TDE3 154 aaKnown RBP6.24□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM263Q8WUH6 116 aaKnown RBP6.24□□□□□ -1.41
CCDC171-204ENST00000470191 TMPRSS5Q9H3S3 457 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 U3KQ87 197 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 FAT1Q14517 4588 aa6.24□□□□□ -1.41
CCDC171-204ENST00000470191 IGKV1OR2-108A0A075B7D4 117 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 A0A087WTM6 91 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 A0A096LPF7 62 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 SNURFLB1AK76 121 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 B3GALNT1O75752 331 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 NXPH4O95158 308 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 RAB3DO95716 219 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 IAPPP10997 89 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 GPX4P36969 197 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-204ENST00000470191 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 TMED4Q7Z7H5 227 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 OR8A1Q8NGG7 326 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 LRRC20Q8TCA0 184 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 TRGV9Q99603 122 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 RTBDNQ9BSG5 229 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM147Q9BVK8 224 aa6.23□□□□□ -1.41
CCDC171-204ENST00000470191 SNRPCP09234 159 aaKnown RBP6.22□□□□□ -1.41
CCDC171-204ENST00000470191 GPR107Q5VW38 600 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 GGNBP1Q5YKI7 109 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 TMEM182Q6ZP80 229 aaPredicted RBP6.22□□□□□ -1.41
CCDC171-204ENST00000470191 Q6ZTI0 123 aa6.22□□□□□ -1.41
CCDC171-204ENST00000470191 CCDC190Q86UF4 302 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms