RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 PRSS22Q9GZN4 317 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 OTORQ9NRC9 128 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 TMEM14CQ9P0S9 112 aa11.57□□□□□ -0.56
CBWD3-205ENST00000469687 COL12A1Q99715 3063 aa11.56□□□□□ -0.56
CBWD3-205ENST00000469687 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
CBWD3-205ENST00000469687 IL4P05112 153 aa11.56□□□□□ -0.56
CBWD3-205ENST00000469687 KRTDAPP60985 99 aa11.56□□□□□ -0.56
CBWD3-205ENST00000469687 Q86TA4 180 aa11.56□□□□□ -0.56
CBWD3-205ENST00000469687 RPP21Q9H633 154 aaKnown RBP11.56□□□□□ -0.56
CBWD3-205ENST00000469687 ZMAT5Q9UDW3 170 aaKnown RBP11.56□□□□□ -0.56
CBWD3-205ENST00000469687 NCBP2LA6PVI3 153 aaKnown RBP11.55□□□□□ -0.56
CBWD3-205ENST00000469687 HOXB4P17483 251 aaPredicted RBP11.55□□□□□ -0.56
CBWD3-205ENST00000469687 DTX2Q86UW9 622 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 LINC00469Q8N7U9 141 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 SMIM12Q96EX1 92 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 SHANK2-AS3Q9BTD1 123 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 NRN1Q9NPD7 142 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 H3BRN7 92 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 EREGO14944 169 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 Q8N976 141 aa11.55□□□□□ -0.56
CBWD3-205ENST00000469687 TRBV19A0A075B6N1 114 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 ZNF785A8K8V0 405 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-205ENST00000469687 ZNF324O75467 553 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-205ENST00000469687 P01737 135 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 PGLYRP4Q96LB8 373 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 CHRDL1Q9BU40 450 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 GNG7O60262 68 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 IGLC2P0DOY2 106 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 FCGR2BP31994 310 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-205ENST00000469687 NIT1Q86X76 327 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 PAM16Q9Y3D7 125 aa11.54□□□□□ -0.56
CBWD3-205ENST00000469687 MRPS12O15235 138 aaKnown RBP11.53□□□□□ -0.56
CBWD3-205ENST00000469687 NTF3P20783 257 aa11.53□□□□□ -0.56
CBWD3-205ENST00000469687 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
CBWD3-205ENST00000469687 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
CBWD3-205ENST00000469687 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
CBWD3-205ENST00000469687 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
CBWD3-205ENST00000469687 HLA-DRB1P01911 266 aa11.52□□□□□ -0.56
CBWD3-205ENST00000469687 Q8N6K4 173 aa11.52□□□□□ -0.56
CBWD3-205ENST00000469687 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.56
CBWD3-205ENST00000469687 UBTD1Q9HAC8 227 aa11.52□□□□□ -0.56
CBWD3-205ENST00000469687 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.57
CBWD3-205ENST00000469687 A8MWL6 223 aa11.52□□□□□ -0.57
CBWD3-205ENST00000469687 M0R3E3 92 aa11.52□□□□□ -0.57
CBWD3-205ENST00000469687 SNHG12Q9BXW3 62 aa11.52□□□□□ -0.57
CBWD3-205ENST00000469687 NPIPB5A8MRT5 1133 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 OR2J3O76001 311 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 NDUFB8O95169 186 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 RNF224P0DH78 156 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 COL8A1P27658 744 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 HBBP68871 147 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 ATP5L2Q7Z4Y8 100 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 OR4F17Q8NGA8 305 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
CBWD3-205ENST00000469687 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 C2orf88Q9BSF0 95 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 SIRPDQ9H106 197 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 DIRC3C9JPN6 131 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 EGR2P11161 476 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-205ENST00000469687 TMEM11P17152 192 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 UQCRFS1P47985 274 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 Q56UQ5 140 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 FAM120AOSQ5T036 256 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 ZNF414Q96IQ9 312 aa11.51□□□□□ -0.57
CBWD3-205ENST00000469687 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 NPIPB6E9PJ23 425 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 M0QZ24 198 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 FOXA3P55318 350 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-205ENST00000469687 CT83Q5H943 113 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 C1orf122Q6ZSJ8 110 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 TTC9CQ8N5M4 171 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 VAMP8Q9BV40 100 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 IGHV7-81A0A0B4J1V7 117 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 MFAP4P55083 255 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 URB1-AS1Q96HZ7 61 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
CBWD3-205ENST00000469687 SPTAN1Q13813 2472 aaKnown RBP11.49□□□□□ -0.57
CBWD3-205ENST00000469687 OVOL3O00110 214 aa11.49□□□□□ -0.57
CBWD3-205ENST00000469687 KLF5Q13887 457 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-205ENST00000469687 AJUBAQ96IF1 538 aa11.49□□□□□ -0.57
CBWD3-205ENST00000469687 IGHV3-35A0A0C4DH35 117 aa11.48□□□□□ -0.57
CBWD3-205ENST00000469687 EBI3Q14213 229 aa11.48□□□□□ -0.57
CBWD3-205ENST00000469687 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
CBWD3-205ENST00000469687 ZNF705AQ6ZN79 300 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-205ENST00000469687 RBPMS2Q6ZRY4 209 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms