RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 RBMXL3Q8N7X1 1067 aaKnown RBP7.21□□□□□ -1.25
SMARCE1-207ENST00000469334 HIST1H4GQ99525 98 aa7.21□□□□□ -1.25
SMARCE1-207ENST00000469334 Q9H3A6 140 aa7.21□□□□□ -1.25
SMARCE1-207ENST00000469334 TRBV7-3A0A075B6L6 115 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 IGHV1-45A0A0A0MS14 117 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 LOC389332A0A1B0GUA5 103 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 ZNHIT1O43257 154 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 BRI3O95415 125 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 IL4P05112 153 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 GRPP07492 148 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 CFHR2P36980 270 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 LOXL3P58215 753 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 ERHP84090 104 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 TBC1D28Q2M2D7 210 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 PIP4P1Q86T03 277 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 SRSF12Q8WXF0 261 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 IMMP1LQ96LU5 166 aa7.21□□□□□ -1.26
SMARCE1-207ENST00000469334 M0QXV9 152 aa7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 NDUFV3P56181 108 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 MRPL14Q6P1L8 145 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 SBSPONQ8IVN8 264 aa7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 PPP1R35Q8TAP8 253 aa7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 SGK494Q96LW2 274 aa7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 MAP1LC3AQ9H492 121 aa7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 YAE1D1Q9NRH1 226 aa7.2□□□□□ -1.26
SMARCE1-207ENST00000469334 WNT9BO14905 357 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 HOXA3O43365 443 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 GP9P14770 177 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 CD27P26842 260 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 FCER1GP30273 86 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 MNX1P50219 401 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 GLMPQ8WWB7 406 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 RPEQ96AT9 228 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 CXXC4Q9H2H0 198 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 IGKV1D-37A0A075B6S9 117 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 ZNF785A8K8V0 405 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 FCN3O75636 299 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 GAGE2BQ13066 116 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 C11orf53Q8IXP5 236 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 ZCCHC24Q8N2G6 241 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 CIARTQ8N365 385 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 CARD19Q96LW7 228 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 F5P12259 2224 aa7.19□□□□□ -1.26
SMARCE1-207ENST00000469334 CACNA1DQ01668 2161 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 A0A087WX48 190 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 IGLV2-11P01706 119 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 CELA2AP08217 269 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 SAA2P0DJI9 122 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 COX6A1P12074 109 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 IFITM1P13164 125 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 MYOD1P15172 320 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 CCL11P51671 97 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 FOXG1P55316 489 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 MLANAQ16655 118 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 MRPL51Q4U2R6 128 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 FREM1Q5H8C1 2179 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 FAM90A27PA6NNH2 459 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 NCBP2LA6PVI3 153 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 A8MWV9 139 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 SNCGO76070 127 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 ZNF134P52741 427 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 UBE2D3P61077 147 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 UBE2D2P62837 147 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 PRR30Q53SZ7 412 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 PRNTQ86SH4 94 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 GTSCR1Q86UQ5 136 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 TUSC5Q8IXB3 177 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 TRGV9Q99603 122 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 DCTN5Q9BTE1 182 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 TMEM126AQ9H061 195 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 NDUFA4L2Q9NRX3 87 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
SMARCE1-207ENST00000469334 PRSS1P07477 247 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 EDDM3AQ14507 147 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 TMEM30BQ3MIR4 351 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 TTC32Q5I0X7 151 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 MDP1Q86V88 176 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 FAM169BQ8N8A8 192 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 NPIPB3Q92617 1050 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 FBXL15Q9H469 300 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 METRNQ9UJH8 293 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 SSUH2Q9Y2M2 353 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 AGRNO00468 2067 aa7.17□□□□□ -1.26
SMARCE1-207ENST00000469334 MYMXA0A1B0GTQ4 84 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 NPYP01303 97 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 PLNP26678 52 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 CKS2P33552 79 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 NXPH1P58417 271 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 DIAPH2-AS1Q14236 149 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms