RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DYNC2LI1Q8TCX1 351 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 SOSTQ9BQB4 213 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 NBDYA0A0U1RRE5 68 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 FABP12A6NFH5 140 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 H3BP45 60 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 HOXB5P09067 269 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 ANXA3P12429 323 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 HTN1P15515 57 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 SPANXN5Q5MJ07 72 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 GGNBP1Q5YKI7 109 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
HDAC3-204ENST00000469207 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 SYNGR2O43760 224 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 SNRPCP09234 159 aaKnown RBP8.58□□□□□ -1.04
HDAC3-204ENST00000469207 VAMP1P23763 118 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 MEOX2P50222 304 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 C15orf53Q8NAA6 179 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 BPIFCQ8NFQ6 507 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 LINC01587Q99440 93 aa8.58□□□□□ -1.04
HDAC3-204ENST00000469207 CCNKO75909 580 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
HDAC3-204ENST00000469207 INSP01308 110 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 SRPXP78539 464 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 AKR1C1Q04828 323 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 PPP1R1AQ13522 171 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 TMEM128Q5BJH2 165 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 MAPKAPK5-AS1Q8N8E1 139 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 ZNF738Q8NE65 137 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 OR4D5Q8NGN0 318 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 RNF141Q8WVD5 230 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 UHRF2Q96PU4 802 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 TMEM147Q9BVK8 224 aa8.57□□□□□ -1.04
HDAC3-204ENST00000469207 MRPS26Q9BYN8 205 aaKnown RBP8.57□□□□□ -1.04
HDAC3-204ENST00000469207 SLIRPQ9GZT3 109 aaKnown RBP8.57□□□□□ -1.04
HDAC3-204ENST00000469207 RSL24D1Q9UHA3 163 aaKnown RBP8.57□□□□□ -1.04
HDAC3-204ENST00000469207 H3BRN7 92 aa8.56□□□□□ -1.04
HDAC3-204ENST00000469207 CFDP00746 253 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-204ENST00000469207 RHOBP62745 196 aa8.56□□□□□ -1.04
HDAC3-204ENST00000469207 HIST1H1AQ02539 215 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-204ENST00000469207 ACOT7LQ6ZUV0 252 aa8.56□□□□□ -1.04
HDAC3-204ENST00000469207 LRTM2Q8N967 370 aa8.56□□□□□ -1.04
HDAC3-204ENST00000469207 PARD6GQ9BYG4 376 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-204ENST00000469207 CCDC59Q9P031 241 aaKnown RBP8.56□□□□□ -1.04
HDAC3-204ENST00000469207 SLC45A2Q9UMX9 530 aa8.56□□□□□ -1.04
HDAC3-204ENST00000469207 RABL2BQ9UNT1 228 aa8.56□□□□□ -1.04
HDAC3-204ENST00000469207 DUXBA0A1W2PPF3 345 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 SMCO3A2RU48 225 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 CBY3A6NI87 242 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 PMS2P5A8MQ11 134 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 BOLA2-SMG1P6H3BVE0 249 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 MED6O75586 246 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 ADAP1O75689 374 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 SFT2D2O95562 160 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 IL5P05113 134 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 OR5G3P0C626 314 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 SLC25A6P12236 298 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 CXCL3P19876 107 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 TSPOP30536 169 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 FAM3BP58499 235 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-204ENST00000469207 RRAS2P62070 204 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-204ENST00000469207 POLR2GP62487 172 aaKnown RBP eCLIP8.55□□□□□ -1.04
HDAC3-204ENST00000469207 RPP30P78346 268 aaKnown RBP8.55□□□□□ -1.04
HDAC3-204ENST00000469207 SAMD13Q5VXD3 122 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 PATE2Q6UY27 113 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 CYP2G1PQ6ZSU1 146 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 OR8A1Q8NGG7 326 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 SHANK2-AS3Q9BTD1 123 aa8.55□□□□□ -1.04
HDAC3-204ENST00000469207 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
HDAC3-204ENST00000469207 RABL2AQ9UBK7 228 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-204ENST00000469207 ATP5G1P05496 136 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 ATP5G3P48201 142 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 CCL18P55774 89 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 OR5I1Q13606 314 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 PSG3Q16557 428 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 PYDC2Q56P42 97 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 SSX7Q7RTT5 188 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 TMEM144Q7Z5S9 345 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 TOMM5Q8N4H5 51 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 RAB2BQ8WUD1 216 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 TRIM63Q969Q1 353 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 GPR82Q96P67 336 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 CIB3Q96Q77 187 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-204ENST00000469207 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 Q9H8V8 135 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 HIGD1AQ9Y241 93 aa8.54□□□□□ -1.04
HDAC3-204ENST00000469207 STRAPQ9Y3F4 350 aaKnown RBP8.54□□□□□ -1.04
HDAC3-204ENST00000469207 A0A0J9YY99 117 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 H3BTX0 84 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 HYPMO75409 117 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 LINC00869P0C866 280 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 TMBIM6P55061 237 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 RAP2BP61225 183 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 ID3Q02535 119 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 MCFD2Q8NI22 146 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms