RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
NUP50-214ENST00000469163 TEP1Q99973 2627 aaKnown RBP8.12□□□□□ -1.11
NUP50-214ENST00000469163 NHP2Q9NX24 153 aaKnown RBP8.12□□□□□ -1.11
NUP50-214ENST00000469163 C3orf85A0A1B0GTC6 90 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 UCNP55089 124 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 FAM53AQ6NSI3 398 aaPredicted RBP8.11□□□□□ -1.11
NUP50-214ENST00000469163 FAM19A5Q7Z5A7 132 aaPredicted RBP8.11□□□□□ -1.11
NUP50-214ENST00000469163 ZNRF1Q8ND25 227 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 SGK494Q96LW2 274 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 HSD17B10Q99714 261 aaKnown RBP8.11□□□□□ -1.11
NUP50-214ENST00000469163 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.11□□□□□ -1.11
NUP50-214ENST00000469163 IGHMP01871 453 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 AMY1AP04745 511 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 GATA4P43694 442 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 RTL8BQ17RB0 113 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 C10orf128Q5T292 105 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 LIME1Q9H400 295 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 SAP30LQ9HAJ7 183 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 SNCGO76070 127 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 CDSNQ15517 529 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 SPANXN5Q5MJ07 72 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 IBA57Q5T440 356 aaKnown RBP8.11□□□□□ -1.11
NUP50-214ENST00000469163 ITLN1Q8WWA0 313 aa8.11□□□□□ -1.11
NUP50-214ENST00000469163 IGKV1-27A0A075B6S5 117 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 CENPVL3A0A0U1RRI6 287 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 HIST2H2BCQ6DN03 193 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 TAF15Q92804 592 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP50-214ENST00000469163 ANAPC10Q9UM13 185 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 PRRC2AP48634 2157 aaKnown RBP8.1□□□□□ -1.11
NUP50-214ENST00000469163 TRAV24A0A0B4J272 114 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 K7EMI3 77 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 TUSC2O75896 110 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 FHL3Q13643 280 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 ZNF525Q8N782 197 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 C11orf1Q9H5F2 150 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 GNG12Q9UBI6 72 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 CELSR2Q9HCU4 2923 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
NUP50-214ENST00000469163 IGHV1-18A0A0C4DH31 117 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 F8WDY8 70 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 DNPH1O43598 174 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 SLC25A5P05141 298 aaKnown RBP8.09□□□□□ -1.11
NUP50-214ENST00000469163 NMUP48645 174 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 TNFAIP6P98066 277 aaPredicted RBP8.09□□□□□ -1.11
NUP50-214ENST00000469163 OR13C6PQ8NH95 151 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 ADTRPQ96IZ2 230 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 RTL8AQ9BWD3 113 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 CAMPP49913 170 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 ARL16Q0P5N6 197 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 IZUMO4Q1ZYL8 232 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 EDA2RQ9HAV5 297 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 PSENENQ9NZ42 101 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.09□□□□□ -1.11
NUP50-214ENST00000469163 COX5AP20674 150 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
NUP50-214ENST00000469163 CX3CL1P78423 397 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 IGFBPL1Q8WX77 278 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
NUP50-214ENST00000469163 IGKV1-12A0A0C4DH73 117 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 TEX50A0A1B0GTY4 177 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 TMEM8BA6NDV4 472 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 IGKV1D-12P01611 117 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 REG1BP48304 166 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 GNG5P63218 68 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 SPRNQ5BIV9 151 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 NMSQ5H8A3 153 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 DUX4L9Q6RFH8 374 aaPredicted RBP8.08□□□□□ -1.12
NUP50-214ENST00000469163 CCL13Q99616 98 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
NUP50-214ENST00000469163 EXPH5Q8NEV8 1989 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 ANKRD17O75179 2603 aaKnown RBP8.08□□□□□ -1.12
NUP50-214ENST00000469163 GTSF1Q8WW33 167 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 C18orf15Q96N68 181 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 PRDM14Q9GZV8 571 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 APELAP0DMC3 54 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 EDN2P20800 178 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 ID3Q02535 119 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 BCL6BQ8N143 479 aaPredicted RBP8.08□□□□□ -1.12
NUP50-214ENST00000469163 FGFRL1Q8N441 504 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 MAPK1IP1LQ8NDC0 245 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 ZNF502Q8TBZ5 544 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 SIGLEC8Q9NYZ4 499 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
NUP50-214ENST00000469163 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 K7EN84 100 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 NDUFS7O75251 213 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 SPINK9Q5DT21 86 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 TEX45Q8NA69 505 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 LIN7CQ9NUP9 197 aaKnown RBP8.07□□□□□ -1.12
NUP50-214ENST00000469163 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 PLXNB1O43157 2135 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 IGHG3P01860 377 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 CD3EP07766 207 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 CD40P25942 277 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 FXYD2P54710 66 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 MFAP2P55001 183 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 CR1LQ2VPA4 569 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 TMEM78Q5T7P6 136 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms