RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 RPP25LQ8N5L8 163 aaKnown RBP5.46□□□□□ -1.54
NXF3-204ENST00000468528 OR2K2Q8NGT1 345 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 TMEM37Q8WXS4 190 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 SAT2Q96F10 170 aaPredicted RBP5.46□□□□□ -1.54
NXF3-204ENST00000468528 RCC1LQ96I51 464 aaKnown RBP5.46□□□□□ -1.54
NXF3-204ENST00000468528 ZNF414Q96IQ9 312 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 MDFIQ99750 246 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 RHPN1-AS1Q9BWJ2 59 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 VSIRQ9H7M9 311 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 RPRMQ9NS64 109 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 WNK1Q9H4A3 2382 aa5.46□□□□□ -1.54
NXF3-204ENST00000468528 TRAV1-1A0A0B4J248 108 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 TRAV25A0A0B4J276 109 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 HBE1P02100 147 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 FOLR2P14207 255 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 CD33P20138 364 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 PPT1P50897 306 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 PAFAH1B2P68402 229 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 BLOC1S1P78537 153 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 GUK1Q16774 197 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 C9orf66Q5T8R8 295 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 C16orf54Q6UWD8 224 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 PATE2Q6UY27 113 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 ZNF680Q8NEM1 530 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 DUX3Q96PT4 197 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 SEPSECSQ9HD40 501 aaKnown RBP5.45□□□□□ -1.54
NXF3-204ENST00000468528 CLEC5AQ9NY25 188 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 TMEM14CQ9P0S9 112 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 DOK5Q9P104 306 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 UBQLN2Q9UHD9 624 aa5.45□□□□□ -1.54
NXF3-204ENST00000468528 TRAV2A0A0B4J234 112 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 ZNF705EA8MWA4 302 aaPredicted RBP5.44□□□□□ -1.54
NXF3-204ENST00000468528 CHEK1O14757 476 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 WIPF1O43516 503 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 EIF4EBP3O60516 100 aaPredicted RBP5.44□□□□□ -1.54
NXF3-204ENST00000468528 ZNF253O75346 499 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 CXorf1O96002 111 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 CSN3P07498 182 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 H2AFB1P0C5Y9 115 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 STAG3L2P0CL84 134 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 STAG3L3P0CL85 134 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 TAGLN2P37802 199 aaKnown RBP5.44□□□□□ -1.54
NXF3-204ENST00000468528 PSMB3P49720 205 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 RAB14P61106 215 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 PMS2P11Q13670 270 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 PDE6HQ13956 83 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 PRR31Q5SQ13 230 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 ALKAL2Q6UX46 152 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 SIGLEC15Q6ZMC9 328 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 FAM213BQ8TBF2 198 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 DYNLRB2Q8TF09 96 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 MBD3L1Q8WWY6 194 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 RAB24Q969Q5 203 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 UHRF2Q96PU4 802 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 HRH4Q9H3N8 390 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 TMEM167BQ9NRX6 74 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 ARL2-SNX15V9GYD0 113 aa5.44□□□□□ -1.54
NXF3-204ENST00000468528 IGHV3OR16-8A0A075B7F1 116 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 MAP1LC3B2A6NCE7 125 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 TSPAN4O14817 238 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 RGS13O14921 159 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 ZNF207O43670 478 aaKnown RBP5.43□□□□□ -1.54
NXF3-204ENST00000468528 OR7C2O60412 319 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 SAP30O75446 220 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 HIST1H1EP10412 219 aaKnown RBP5.43□□□□□ -1.54
NXF3-204ENST00000468528 CMC4P56277 68 aaPredicted RBP5.43□□□□□ -1.54
NXF3-204ENST00000468528 GCSAMLQ5JQS6 135 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 LCN12Q6JVE5 192 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 FAM122CQ6P4D5 195 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 LCN15Q6UWW0 184 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 IL34Q6ZMJ4 242 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 RBPMS2Q6ZRY4 209 aaKnown RBP5.43□□□□□ -1.54
NXF3-204ENST00000468528 LYPD1Q8N2G4 141 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 SFT2D1Q8WV19 159 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 GLMPQ8WWB7 406 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 FAM167A-AS1Q96KT0 104 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 SPAG8Q99932 426 aaPredicted RBP5.43□□□□□ -1.54
NXF3-204ENST00000468528 PAXXQ9BUH6 204 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 SCRT1Q9BWW7 348 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 NKX6-2Q9C056 277 aaPredicted RBP5.43□□□□□ -1.54
NXF3-204ENST00000468528 MAP1LC3BQ9GZQ8 125 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 OR51M1Q9H341 326 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 SLC25A22Q9H936 323 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 NRN1Q9NPD7 142 aa5.43□□□□□ -1.54
NXF3-204ENST00000468528 A0A087X0K7 114 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 OR4C46A6NHA9 309 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 ZNF785A8K8V0 405 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 IGLV1-51P01701 117 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 NBEAP1P0C6P0 100 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 ARL14EPLP0DKL9 152 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 IGLC2P0DOY2 106 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 GP9P14770 177 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 RPL11P62913 178 aaKnown RBP5.42□□□□□ -1.54
NXF3-204ENST00000468528 PSG9Q00887 426 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 DEFB114Q30KQ6 69 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 FAM90A2PQ658T7 463 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 HIST2H2BDQ6DRA6 164 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 MIR17HGQ75NE6 70 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 TCF24Q7RTU0 167 aa5.42□□□□□ -1.54
NXF3-204ENST00000468528 ARL6IP6Q8N6S5 226 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms