RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PAGE4O60829 102 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 CXorf1O96002 111 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 MLANAQ16655 118 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 TREML4Q6UXN2 200 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 SLC16A13Q7RTY0 426 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 OR4X1Q8NH49 305 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.59
DDX56-208ENST00000467318 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.59
DDX56-208ENST00000467318 PEF1Q9UBV8 284 aaKnown RBP11.4□□□□□ -0.59
DDX56-208ENST00000467318 ADARB2-AS1A8MUL3 147 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 CLN5O75503 358 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 TRGC2P03986 189 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 CLEC3BP05452 202 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 PFN1P07737 140 aaKnown RBP11.39□□□□□ -0.59
DDX56-208ENST00000467318 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 SLC35E1Q96K37 410 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 OR51M1Q9H341 326 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 S4R3C0 116 aa11.39□□□□□ -0.59
DDX56-208ENST00000467318 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 GNG7O60262 68 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BKO60814 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 SCGB2A1O75556 95 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 IGHV3-48P01763 117 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BJP06899 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BOP23527 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BBP33778 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BDP58876 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BCP62807 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST2H2BEQ16778 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 NSUN5P1Q3KNT7 163 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 Q56UQ5 140 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.38□□□□□ -0.59
DDX56-208ENST00000467318 KCNIP4Q6PIL6 250 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BHQ93079 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BNQ99877 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 HIST1H2BMQ99879 126 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 NIT2Q9NQR4 276 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 PXMP4Q9Y6I8 212 aa11.38□□□□□ -0.59
DDX56-208ENST00000467318 TRAV30A0A087WSZ9 112 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 HMGB3O15347 200 aaKnown RBP11.37□□□□□ -0.59
DDX56-208ENST00000467318 IGHV3-23P01764 117 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 GALR1P47211 349 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 RPL29P47914 159 aaKnown RBP11.37□□□□□ -0.59
DDX56-208ENST00000467318 B2MP61769 119 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 RHOBP62745 196 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 GAMTQ14353 236 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 C8orf86Q6ZUL3 223 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 IMMP2LQ96T52 175 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 GGTLC1Q9BX51 225 aa11.37□□□□□ -0.59
DDX56-208ENST00000467318 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
DDX56-208ENST00000467318 TRGC1P0CF51 173 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 GPR183P32249 361 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 CTAG1AP78358 180 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 DPF1Q92782 380 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 ACY3Q96HD9 319 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 MGST2Q99735 147 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
DDX56-208ENST00000467318 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 GGCTO75223 188 aaKnown RBP11.36□□□□□ -0.59
DDX56-208ENST00000467318 YIF1AO95070 293 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 FABP1P07148 127 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 ARL3P36405 182 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 FAM3BP58499 235 aaPredicted RBP11.36□□□□□ -0.59
DDX56-208ENST00000467318 TMEM144Q7Z5S9 345 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 OR51G1Q8NGK1 321 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 OR1N2Q8NGR9 330 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
DDX56-208ENST00000467318 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
DDX56-208ENST00000467318 PPP5D1E7EU14 171 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 LINC01619G3V211 115 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 CCL24O00175 119 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 TRBV12-3P01733 135 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 CTSGP08311 255 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 GATAD1Q8WUU5 269 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 FRZBQ92765 325 aa11.35□□□□□ -0.59
DDX56-208ENST00000467318 BMPR1BO00238 502 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 IGLC1P0CG04 106 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 MYCNOSP40205 109 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 SPATA3Q8NHX4 192 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 RAX2Q96IS3 184 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 UHRF2Q96PU4 802 aa11.34□□□□□ -0.59
DDX56-208ENST00000467318 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.6
DDX56-208ENST00000467318 A0A087WW49 117 aa11.33□□□□□ -0.6
DDX56-208ENST00000467318 M0QZ24 198 aa11.33□□□□□ -0.6
DDX56-208ENST00000467318 TYMSP04818 313 aa11.33□□□□□ -0.6
DDX56-208ENST00000467318 OR10J1P30954 320 aa11.33□□□□□ -0.6
DDX56-208ENST00000467318 RELQ04864 619 aaPredicted RBP11.33□□□□□ -0.6
DDX56-208ENST00000467318 FHL3Q13643 280 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms