RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 TNS3Q68CZ2 1445 aa0.64□□□□□ -2.31
ATG3-204ENST00000467275 EIF3AQ14152 1382 aaKnown RBP0.63□□□□□ -2.31
ATG3-204ENST00000467275 A0A087WSZ3 146 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 IGHV1-58A0A0C4DH39 117 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 G3V2T6 193 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 H7C1C5 153 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 NUPR1O60356 82 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 BANF1O75531 89 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 IGLV1-51P01701 117 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 CRHP06850 196 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 PHBP35232 272 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 LCN6P62502 163 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 SCGB2B2Q4G0G5 96 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 SPRNQ5BIV9 151 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 FAM74A1Q5RGS3 127 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 ST6GALNAC3Q8NDV1 305 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 CDC26Q8NHZ8 85 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 LINC00052Q96N35 136 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 AMELYQ99218 206 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 PAIP2Q9BPZ3 127 aaKnown RBP0.63□□□□□ -2.31
ATG3-204ENST00000467275 LYRM2Q9NU23 88 aaPredicted RBP0.63□□□□□ -2.31
ATG3-204ENST00000467275 STOML2Q9UJZ1 356 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 ARHGEF11O15085 1522 aa0.63□□□□□ -2.31
ATG3-204ENST00000467275 PEAK1Q9H792 1746 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 TRAV10A0A0B4J240 114 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 TLCD2A6NGC4 264 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 C17orf112F2Z3M2 114 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 IFNA1P01562 189 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 INSL3P51460 131 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 C1orf134Q5TEV5 83 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 C2orf82Q6UX34 121 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 C4orf22Q6V702 233 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 AP3S1Q92572 193 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 BORCS5Q969J3 196 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 LYSMD1Q96S90 227 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 GINS3Q9BRX5 216 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 PBOV1Q9GZY1 135 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 POPDC3Q9HBV1 291 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 TAS2R7Q9NYW3 318 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 ORMDL1Q9P0S3 153 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 KDM6AO15550 1401 aaPredicted RBP0.62□□□□□ -2.31
ATG3-204ENST00000467275 CITO14578 2027 aa0.62□□□□□ -2.31
ATG3-204ENST00000467275 COL1A1P02452 1464 aaPredicted RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 N4BP2Q86UW6 1770 aaPredicted RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 OR10J4P0C629 311 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 RPL19P84098 196 aaKnown RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 CDK6Q00534 326 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 PSG9Q00887 426 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 LINC00322Q6ZN03 302 aaPredicted RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 GRINAQ7Z429 371 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 TMED4Q7Z7H5 227 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 NUP35Q8NFH5 326 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 OR5D14Q8NGL3 314 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 GPX7Q96SL4 187 aaPredicted RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 CCDC94Q9BW85 323 aaPredicted RBP0.61□□□□□ -2.31
ATG3-204ENST00000467275 SSR3Q9UNL2 185 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 ASB4Q9Y574 426 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 E9PCH4 1651 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 CNTRLQ7Z7A1 2325 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 CEP164Q9UPV0 1460 aa0.61□□□□□ -2.31
ATG3-204ENST00000467275 RFX7Q2KHR2 1363 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 ASCC3Q8N3C0 2202 aaKnown RBP0.6□□□□□ -2.31
ATG3-204ENST00000467275 RIIAD1A6NNX1 92 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 MFSD11O43934 449 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 KLF7O75840 302 aaPredicted RBP0.6□□□□□ -2.31
ATG3-204ENST00000467275 ERC2-IT1O76042 136 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 DNAL4O96015 105 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 CD2P06729 351 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 OGNP20774 298 aaKnown RBP0.6□□□□□ -2.31
ATG3-204ENST00000467275 ARPP19P56211 112 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 GNG3P63215 75 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 POU6F1Q14863 301 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 LYG2Q86SG7 212 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 Q8N6K4 173 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 OR5D16Q8NGK9 328 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 OR13C6PQ8NH95 151 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 Q8TAT8 98 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 POP5Q969H6 163 aaKnown RBP0.6□□□□□ -2.31
ATG3-204ENST00000467275 CHCHD1Q96BP2 118 aaKnown RBP0.6□□□□□ -2.31
ATG3-204ENST00000467275 ZHX1-C8orf76Q96EF9 292 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 PRRT1Q99946 306 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 TMEM70Q9BUB7 260 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 OR2J1Q9GZK6 312 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 TMEM14CQ9P0S9 112 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 SS18L2Q9UHA2 77 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 UHRF1BP1Q6BDS2 1440 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 MGAMO43451 1857 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 FANCMQ8IYD8 2048 aa0.6□□□□□ -2.31
ATG3-204ENST00000467275 TET1Q8NFU7 2136 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 TMEM238C9JI98 176 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 M0R233 179 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 APOA2P02652 100 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 TRGC2P03986 189 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 CXCL1P09341 107 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 RAB5CP51148 216 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 TMBIM6P55061 237 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 SNCBQ16143 134 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 C1orf140Q5VVS0 124 aa0.59□□□□□ -2.31
ATG3-204ENST00000467275 SMIM20Q8N5G0 67 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms