RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SIGMAR1Q99720 223 aa3.9□□□□□ -1.79
PTCD3-207ENST00000467273 ACOT13Q9NPJ3 140 aa3.9□□□□□ -1.79
PTCD3-207ENST00000467273 GNG8Q9UK08 70 aa3.9□□□□□ -1.79
PTCD3-207ENST00000467273 A0A1W2PS18 150 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 TAAR5O14804 337 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 CREBL2O60519 120 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-207ENST00000467273 SLC22A5O76082 557 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 FAM107AO95990 144 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 GCGP01275 180 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 MAS1P04201 325 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 IGKV1-16P04430 117 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 TBPP20226 339 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 HLA-DMBP28068 263 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 S100A7P31151 101 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 GAGE5Q13069 117 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 GAGE6Q13070 117 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 TMEM187Q14656 261 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 SURF2Q15527 256 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-207ENST00000467273 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 C15orf32Q32M92 178 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 RNASE10Q5GAN6 216 aaKnown RBP3.89□□□□□ -1.79
PTCD3-207ENST00000467273 SAMD13Q5VXD3 122 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 TMEM236Q5W0B7 351 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 C15orf54Q8N8G6 183 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 Q8NAQ8 132 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 OR51A4Q8NGJ6 313 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 TBX5Q99593 518 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 SPIN2AQ99865 258 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 SPIN2BQ9BPZ2 258 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 AGMATQ9BSE5 352 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 ABRACLQ9P1F3 81 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
PTCD3-207ENST00000467273 DEFB131BA0A096LNP1 70 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 TMEM212A6NML5 194 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 OR4C45A6NMZ5 311 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 G3V2T6 193 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 SLC17A3O00476 420 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 CYB5BO43169 146 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 RBMY1A1P0DJD3 496 aaKnown RBP3.88□□□□□ -1.79
PTCD3-207ENST00000467273 MIFP14174 115 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 ZNF25P17030 456 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-207ENST00000467273 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
PTCD3-207ENST00000467273 RPL35P42766 123 aaKnown RBP3.88□□□□□ -1.79
PTCD3-207ENST00000467273 EIF2B2P49770 351 aaKnown RBP3.88□□□□□ -1.79
PTCD3-207ENST00000467273 ST3GAL4Q11206 333 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 KLK9Q2XQG4 91 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 RPL39P5Q59GN2 51 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 TMEM128Q5BJH2 165 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 CGB2Q6NT52 195 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 TTC9CQ8N5M4 171 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-207ENST00000467273 OR10G9Q8NGN4 311 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 C18orf15Q96N68 181 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 CCDC32Q9BV29 185 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 TMEM59Q9BXS4 323 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 RNF167Q9H6Y7 350 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 NRN1Q9NPD7 142 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 ZNF581Q9P0T4 197 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 OR1A1Q9P1Q5 309 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 Q9UF83 564 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 SS18L2Q9UHA2 77 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 KLK9Q9UKQ9 250 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 ZNF257Q9Y2Q1 563 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
PTCD3-207ENST00000467273 TRBV7-1A0A0A6YYK4 115 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 CCDC160A6NGH7 325 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 GNGT2O14610 69 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 FABP7O15540 132 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 MRPS14O60783 128 aaKnown RBP3.87□□□□□ -1.79
PTCD3-207ENST00000467273 ATG12O94817 140 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 CDRT1O95170 752 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 IGLV2-23P01705 113 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 CD2P06729 351 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 METTL15P1P0C7V9 234 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 OR13C7P0DN81 318 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 HIST1H1BP16401 226 aaKnown RBP3.87□□□□□ -1.79
PTCD3-207ENST00000467273 HRH1P35367 487 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 ZNF93P35789 620 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-207ENST00000467273 AKR1D1P51857 326 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 CKS1BP61024 79 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 DEFA5Q01523 94 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 ZNF85Q03923 595 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 OR5I1Q13606 314 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 LAGE3Q14657 143 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 HMGN3Q15651 99 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 TIGITQ495A1 244 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 DNLZQ5SXM8 178 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 C12orf73Q69YU5 71 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 ATRAIDQ6UW56 229 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 MOB1BQ7L9L4 216 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 UBE2DNLQ8IWF7 75 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 GATD1Q8NB37 220 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 OR13C6PQ8NH95 151 aa3.87□□□□□ -1.79
PTCD3-207ENST00000467273 MRPL30Q8TCC3 161 aaKnown RBP3.87□□□□□ -1.79
PTCD3-207ENST00000467273 SRSF12Q8WXF0 261 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms