RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 S100A9P06702 114 aaKnown RBP7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 RPL7P18124 248 aaKnown RBP7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 GPR183P32249 361 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 CNN1P51911 297 aaKnown RBP7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 RELQ04864 619 aaPredicted RBP7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 PDE6HQ13956 83 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 ELOBQ15370 118 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 LEMD1Q68G75 181 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 TOMM20LQ6UXN7 152 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 FAM24BQ8N5W8 94 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 TMEM86BQ8N661 226 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 ARL6IP6Q8N6S5 226 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 C5orf17Q8NAS9 161 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 SMIM12Q96EX1 92 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 MS4A10Q96PG2 267 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 IMMP2LQ96T52 175 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 ZNF586Q9NXT0 402 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 RABAC1Q9UI14 185 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 EPDR1Q9UM22 224 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 KLF12Q9Y4X4 402 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 RNF114Q9Y508 228 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 ASH1LQ9NR48 2969 aaKnown RBP7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 DOPEY2Q9Y3R5 2298 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 TRBV19A0A075B6N1 114 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 TRBV24-1A0A075B6N3 115 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 A0A0G2JLM5 398 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 TRGV3P03979 118 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 CRYBA1P05813 215 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 PFN1P07737 140 aaKnown RBP7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 RAB5AP20339 215 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 SRP14P37108 136 aaKnown RBP7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 GNG4P50150 75 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 RANP62826 216 aaKnown RBP7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 TMEM183BQ1AE95 376 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 OCC1Q8TAD7 63 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 IGF2BP2-AS1Q96M15 143 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 PYGO2Q9BRQ0 406 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 Q9H3A6 140 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 UTP20O75691 2785 aaKnown RBP7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 CSPG4Q6UVK1 2322 aa7.38□□□□□ -1.23
APOBEC1-202ENST00000467171 CENPEQ02224 2701 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 TRBV6-1A0A0K0K1D8 114 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 PGPA6NDG6 321 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 ZNF253O75346 499 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 GCGP01275 180 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 IGHG4P01861 327 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 SLC25A5P05141 298 aaKnown RBP7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 ATF4P18848 351 aaPredicted RBP7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 TPPP2P59282 170 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 FLI1Q01543 452 aaPredicted RBP7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 CENPWQ5EE01 88 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 C1orf194Q5T5A4 169 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 TEX38Q6PEX7 206 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 SIGLEC15Q6ZMC9 328 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 CIARTQ8N365 385 aaPredicted RBP7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 BLNKQ8WV28 456 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 BTF3L4Q96K17 158 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 NOL4LQ96MY1 436 aaPredicted RBP7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 GPR82Q96P67 336 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 OR5B12Q96R08 314 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 ATG101Q9BSB4 218 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 PRSS22Q9GZN4 317 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 NPFFR1Q9GZQ6 430 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 LINC00527Q9UJ94 153 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 U3KQE9 123 aa7.37□□□□□ -1.23
APOBEC1-202ENST00000467171 APCP25054 2843 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 CLPSL1A2RUU4 121 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 K7EN84 100 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 EREGO14944 169 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 CD5LO43866 347 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 TCRAP04437 139 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 S100PP25815 95 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 PSMB8P28062 276 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 GALR1P47211 349 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 FOXL1Q12952 345 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 Q8N2B8 174 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 OR10G8Q8NGN5 311 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 MLXQ9UH92 298 aa7.36□□□□□ -1.23
APOBEC1-202ENST00000467171 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 VPS13CQ709C8 3753 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 TENM4Q6N022 2769 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 A0A087X0K7 114 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 SERTM2A0A1B0GWG4 89 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 PGPEP1LA6NFU8 196 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 NDUFA4O00483 81 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 ISLRO14498 428 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 HOXA3O43365 443 aaPredicted RBP7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 BUB3O43684 328 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 GGCTO75223 188 aaKnown RBP7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 ELANEP08246 267 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 PF4V1P10720 104 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms