RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 NKX2-5P52952 324 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-205ENST00000466897 RHOBP62745 196 aa11.43□□□□□ -0.58
NPHP4-205ENST00000466897 GCSAMLQ5JQS6 135 aa11.43□□□□□ -0.58
NPHP4-205ENST00000466897 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
NPHP4-205ENST00000466897 RBPMS2Q6ZRY4 209 aaKnown RBP11.43□□□□□ -0.58
NPHP4-205ENST00000466897 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
NPHP4-205ENST00000466897 RFNGQ9Y644 331 aa11.43□□□□□ -0.58
NPHP4-205ENST00000466897 GALR1P47211 349 aa11.42□□□□□ -0.58
NPHP4-205ENST00000466897 TMEM41BQ5BJD5 291 aa11.42□□□□□ -0.58
NPHP4-205ENST00000466897 FAM78BQ5VT40 261 aa11.42□□□□□ -0.58
NPHP4-205ENST00000466897 EIF5AL1Q6IS14 154 aaKnown RBP11.42□□□□□ -0.58
NPHP4-205ENST00000466897 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
NPHP4-205ENST00000466897 SEPSECSQ9HD40 501 aaKnown RBP11.42□□□□□ -0.58
NPHP4-205ENST00000466897 FUT9Q9Y231 359 aa11.42□□□□□ -0.58
NPHP4-205ENST00000466897 IZUMO1RA6ND01 250 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 UMAD1C9J7I0 102 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 MRPS12O15235 138 aaKnown RBP11.41□□□□□ -0.58
NPHP4-205ENST00000466897 MEOX2P50222 304 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 BEAN1Q3B7T3 259 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 MORN5Q5VZ52 161 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 BPIFA4PQ86YQ2 179 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 OR10G4Q8NGN3 311 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 OR10G9Q8NGN4 311 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 OR10G7Q8NGN6 311 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 MGAM2Q2M2H8 2515 aa11.41□□□□□ -0.58
NPHP4-205ENST00000466897 A0A087X0K7 114 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 ZNF785A8K8V0 405 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 BOLA2-SMG1P6H3BVE0 249 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 TAS2R45P59539 299 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 RAB2AP61019 212 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 LEMD1Q68G75 181 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 RPP25LQ8N5L8 163 aaKnown RBP11.4□□□□□ -0.58
NPHP4-205ENST00000466897 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
NPHP4-205ENST00000466897 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
NPHP4-205ENST00000466897 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 GP9P14770 177 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 KHDC3LQ587J8 217 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 DPPA3Q6W0C5 159 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 MIR17HGQ75NE6 70 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 DCANP1Q8TF63 244 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 FAM110AQ9BQ89 295 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 MS4A6AQ9H2W1 248 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
NPHP4-205ENST00000466897 K7EQG2 157 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 IGLC2P0DOY2 106 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 CDC34P49427 236 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-205ENST00000466897 RAB5CP51148 216 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 KRTAP10-11P60412 298 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 RPL11P62913 178 aaKnown RBP11.38□□□□□ -0.59
NPHP4-205ENST00000466897 GUK1Q16774 197 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 TMED6Q8WW62 240 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 SMAD5-AS1Q9Y6J3 95 aa11.38□□□□□ -0.59
NPHP4-205ENST00000466897 TRAV5A0A0B4J249 113 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 ATF4P18848 351 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-205ENST00000466897 GUCA2BQ16661 112 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 SPATA31B1PQ5VZV4 182 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 FAM122CQ6P4D5 195 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 RAB24Q969Q5 203 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 C17orf77Q96MU5 243 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-205ENST00000466897 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
NPHP4-205ENST00000466897 CTXND1A0A1B0GTU2 59 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 DNASE2O00115 360 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-205ENST00000466897 SOCS3O14543 225 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 ZNF253O75346 499 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 STAG3L2P0CL84 134 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 STAG3L3P0CL85 134 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
NPHP4-205ENST00000466897 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-205ENST00000466897 LCN15Q6UWW0 184 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 GTSCR1Q86UQ5 136 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 NBEAL1Q6ZS30 2694 aa11.36□□□□□ -0.59
NPHP4-205ENST00000466897 IGKV3-7A0A075B6H7 116 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 ISLRO14498 428 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 PSMB3P49720 205 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 SULT1A2P50226 295 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 PDE6HQ13956 83 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
NPHP4-205ENST00000466897 OR7C2O60412 319 aa11.34□□□□□ -0.59
NPHP4-205ENST00000466897 ZNF726P1Q15940 193 aa11.34□□□□□ -0.59
NPHP4-205ENST00000466897 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
NPHP4-205ENST00000466897 SLC50A1Q9BRV3 221 aa11.34□□□□□ -0.59
NPHP4-205ENST00000466897 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms