RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 SPINK6Q6UWN8 80 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 C5orf17Q8NAS9 161 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 PPTC7Q8NI37 304 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 NEK7Q8TDX7 302 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 CHCHD1Q96BP2 118 aaKnown RBP0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 ADAT3Q96EY9 351 aaPredicted RBP0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 PTPRZ1P23471 2315 aaPredicted RBP0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 ARHGEF11O15085 1522 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 ROBO3Q96MS0 1386 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 RIMBP3CA6NJZ7 1639 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 RIMBP3BA6NNM3 1639 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 RIMBP3Q9UFD9 1639 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 ZFYVE26Q68DK2 2539 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 RALGAPA2Q2PPJ7 1873 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 NEO1Q92859 1461 aa0.16□□□□□ -2.38
CHMP2B-202ENST00000466696 PIK3C2GO75747 1445 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 TRBV19A0A075B6N1 114 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 TRAV27A0A087WT01 109 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 A0A087WUJ7 227 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 E7EUB6 86 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 G3V2T6 193 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 TMEM256-PLSCR3K7ERE1 68 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 AIPO00170 330 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 NIPSNAP2O75323 286 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 ATP5HO75947 161 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 OR7C1O76099 320 aaPredicted RBP0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 NDUFC2O95298 119 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 HLA-EP13747 358 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 NFYBP25208 207 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 SRIP30626 198 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 PPP1R2P41236 205 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 DYNLT3P51808 116 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 TMED2Q15363 201 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 VMA21Q3ZAQ7 101 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 SCGB2B2Q4G0G5 96 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 AKIRIN2Q53H80 203 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 CASC2Q6XLA1 102 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 LINC00299Q6ZSB3 139 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 GOLT1AQ6ZVE7 132 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 ARPINQ7Z6K5 226 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 Q8IYB0 196 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 C12orf45Q8N5I9 185 aaPredicted RBP0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 OR8J2Q8NGG1 315 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 OR10X1Q8NGY0 326 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 STAG3L4Q8TBR4 150 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 POP5Q969H6 163 aaKnown RBP0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 CEP19Q96LK0 163 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 SMR3AQ99954 134 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 PBDC1Q9BVG4 233 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 RNASE7Q9H1E1 156 aaKnown RBP0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 RNF122Q9H9V4 155 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 POPDC3Q9HBV1 291 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 CHCHD2Q9Y6H1 151 aaPredicted RBP0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 HECW1Q76N89 1606 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 COL1A1P02452 1464 aaPredicted RBP0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 ECM29Q5VYK3 1845 aa0.15□□□□□ -2.39
CHMP2B-202ENST00000466696 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 DUXBA0A1W2PPF3 345 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 hDV103S1A0JD37 113 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 ODAMA1E959 279 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 C5orf58C9J3I9 102 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 RER1O15258 196 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 SULT1C4O75897 302 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 PRH1P02810 166 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 MT-ND6P03923 174 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 CD14P08571 375 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 CCL4P13236 92 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 RNASE4P34096 147 aaKnown RBP0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 CDKN2CP42773 168 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 ATP5G3P48201 142 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 TMBIM6P55061 237 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 FOXA3P55318 350 aaPredicted RBP0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 MRPS25P82663 173 aaKnown RBP0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 REEP5Q00765 189 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 OCIAD2Q56VL3 154 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 ATOH7Q8N100 152 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 GRPEL2Q8TAA5 225 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 Q8TAT8 98 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 ZC2HC1AQ96GY0 325 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 TEX37Q96LM6 180 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 HYLS1Q96M11 299 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 LYSMD1Q96S90 227 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 C9orf16Q9BUW7 83 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 OR2J1Q9GZK6 312 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 TMEM126AQ9H061 195 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 TMEM133Q9H2Q1 129 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 UCK1Q9HA47 277 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 CACYBPQ9HB71 228 aaKnown RBP0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 ZDBF2Q9HCK1 2354 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 ADCY9O60503 1353 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 CEP192Q8TEP8 1941 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 CECR2Q9BXF3 1484 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 HECW2Q9P2P5 1572 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 PIEZO1Q92508 2521 aa0.14□□□□□ -2.39
CHMP2B-202ENST00000466696 FRAS1Q86XX4 4008 aa0.13□□□□□ -2.39
CHMP2B-202ENST00000466696 DENND4CQ5VZ89 1909 aa0.13□□□□□ -2.39
CHMP2B-202ENST00000466696 DMBT1Q9UGM3 2413 aaPredicted RBP0.13□□□□□ -2.39
CHMP2B-202ENST00000466696 TRAV4A0A0B4J268 109 aa0.13□□□□□ -2.39
CHMP2B-202ENST00000466696 A0A0D9SG42 100 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms