RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SULT1A2P50226 295 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 RHOBP62745 196 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 DEFB114Q30KQ6 69 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 EIF5AL1Q6IS14 154 aaKnown RBP8.4□□□□□ -1.06
VCP-204ENST00000466100 FAM122CQ6P4D5 195 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 ZNF503Q96F45 646 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 NARS2Q96I59 477 aaKnown RBP8.4□□□□□ -1.06
VCP-204ENST00000466100 SLC25A2Q9BXI2 301 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 TMEM231Q9H6L2 316 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 IGLL1P15814 213 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 S100A7P31151 101 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 BMI1P35226 326 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 CDC34P49427 236 aaPredicted RBP8.39□□□□□ -1.07
VCP-204ENST00000466100 FHITP49789 147 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 INSL3P51460 131 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 CD300EQ496F6 205 aaPredicted RBP8.39□□□□□ -1.07
VCP-204ENST00000466100 FAM74A1Q5RGS3 127 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 C9orf66Q5T8R8 295 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 S100A7AQ86SG5 101 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 TMEM61Q8N0U2 210 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 GRAMD2BQ96HH9 432 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 MCRIP2Q9BUT9 160 aaKnown RBP8.39□□□□□ -1.07
VCP-204ENST00000466100 PFDN2Q9UHV9 154 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 SMAD5-AS1Q9Y6J3 95 aa8.39□□□□□ -1.07
VCP-204ENST00000466100 MEGF8Q7Z7M0 2845 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 A0A087X0K7 114 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 CTXND1A0A1B0GTU2 59 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 IZUMO1RA6ND01 250 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 STAG3L2P0CL84 134 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 STAG3L3P0CL85 134 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 IGLC2P0DOY2 106 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 RPL7P18124 248 aaKnown RBP8.38□□□□□ -1.07
VCP-204ENST00000466100 TEX261Q6UWH6 196 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 SIGLEC15Q6ZMC9 328 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 TCF24Q7RTU0 167 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 OR8I2Q8N0Y5 310 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 RAB24Q969Q5 203 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 GPR82Q96P67 336 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 ACTR3CQ9C0K3 210 aaPredicted RBP8.38□□□□□ -1.07
VCP-204ENST00000466100 TMEM14CQ9P0S9 112 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
VCP-204ENST00000466100 TRAV25A0A0B4J276 109 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 A0A1W2PPV4 95 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 HELTA6NFD8 242 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 TSPAN4O14817 238 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 CD5P06127 495 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 PYYP10082 97 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 RAB5CP51148 216 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 IFITM2Q01629 132 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 KHDC3LQ587J8 217 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 BPIFA4PQ86YQ2 179 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 ZNF680Q8NEM1 530 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 MBD3L1Q8WWY6 194 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 FXYD5Q96DB9 178 aa8.37□□□□□ -1.07
VCP-204ENST00000466100 ZNF785A8K8V0 405 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 H3BQ15 152 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 SOCS3O14543 225 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 HMGB3O15347 200 aaKnown RBP8.36□□□□□ -1.07
VCP-204ENST00000466100 ARL14EPLP0DKL9 152 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 GALR1P47211 349 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 TAS2R45P59539 299 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 SAMD5Q5TGI4 173 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 SUN5Q8TC36 379 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 DCANP1Q8TF63 244 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 MS4A6AQ9H2W1 248 aa8.36□□□□□ -1.07
VCP-204ENST00000466100 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 OR7C2O60412 319 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 HIST1H1EP10412 219 aaKnown RBP8.35□□□□□ -1.07
VCP-204ENST00000466100 EGFEM1PQ0D2K5 195 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 LCN12Q6JVE5 192 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 STXBP6Q8NFX7 210 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 SAT2Q96F10 170 aaPredicted RBP8.35□□□□□ -1.07
VCP-204ENST00000466100 SPAG8Q99932 426 aaPredicted RBP8.35□□□□□ -1.07
VCP-204ENST00000466100 PAXXQ9BUH6 204 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 GPR61Q9BZJ8 451 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 OR51M1Q9H341 326 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 HRH4Q9H3N8 390 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 NRN1Q9NPD7 142 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 ZNF586Q9NXT0 402 aa8.35□□□□□ -1.07
VCP-204ENST00000466100 ZNF256Q9Y2P7 627 aaPredicted RBP8.35□□□□□ -1.07
VCP-204ENST00000466100 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.07
VCP-204ENST00000466100 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.07
VCP-204ENST00000466100 G3V4G9 280 aa8.34□□□□□ -1.07
VCP-204ENST00000466100 K7EQG2 157 aa8.34□□□□□ -1.07
VCP-204ENST00000466100 SLC17A3O00476 420 aa8.34□□□□□ -1.07
VCP-204ENST00000466100 NDUFB4O95168 129 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms