RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SPATA8Q6RVD6 105 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 NPCDR1Q9BY65 106 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 PBOV1Q9GZY1 135 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 PSTPIP2Q9H939 334 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 NUP98P52948 1817 aa0.58□□□□□ -2.32
LRCH3-211ENST00000466054 CHD3Q12873 2000 aaKnown RBP0.57□□□□□ -2.32
LRCH3-211ENST00000466054 F8W1H4 67 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 H3BRM9 83 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 IGLV3-1P01715 115 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 CXCL8P10145 99 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 COX7CP15954 63 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 HOXA6P31267 233 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 DYNLT3P51808 116 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 CDK6Q00534 326 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 MUCL1Q96DR8 90 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 MYLKQ15746 1914 aa0.57□□□□□ -2.32
LRCH3-211ENST00000466054 ADGRL3Q9HAR2 1447 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 HSD11B1P28845 292 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 MRPS25P82663 173 aaKnown RBP0.56□□□□□ -2.32
LRCH3-211ENST00000466054 TMED2Q15363 201 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 PSMF1Q92530 271 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 CCDC94Q9BW85 323 aaPredicted RBP0.56□□□□□ -2.32
LRCH3-211ENST00000466054 C10orf95Q9H7T3 257 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 TMEM138Q9NPI0 162 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 ARL5AQ9Y689 179 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 CAMSAP1Q5T5Y3 1602 aa0.56□□□□□ -2.32
LRCH3-211ENST00000466054 PHRF1Q9P1Y6 1649 aaKnown RBP0.56□□□□□ -2.32
LRCH3-211ENST00000466054 MIA2Q96PC5 1412 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 B4DSR2 109 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 M0R233 179 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 AIPO00170 330 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 NDUFC2O95298 119 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 RAB5CP51148 216 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 NCALDP61601 193 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 C1orf134Q5TEV5 83 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 PATE2Q6UY27 113 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 OR5AS1Q8N127 324 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 OR5D16Q8NGK9 328 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 Q8TAT8 98 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 PHB2Q99623 299 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 PRRT1Q99946 306 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 OR52A1Q9UKL2 312 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 PYCARDQ9ULZ3 195 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 PTPRFP10586 1907 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 DOCK4Q8N1I0 1966 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 RFX7Q2KHR2 1363 aa0.55□□□□□ -2.32
LRCH3-211ENST00000466054 ASCC3Q8N3C0 2202 aaKnown RBP0.54□□□□□ -2.32
LRCH3-211ENST00000466054 DUXBA0A1W2PPF3 345 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 NFYBP25208 207 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 SCGB2B2Q4G0G5 96 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 OR10AG1Q8NH19 301 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 POP5Q969H6 163 aaKnown RBP0.54□□□□□ -2.32
LRCH3-211ENST00000466054 RAB37Q96AX2 223 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 DGCR14Q96DF8 476 aaKnown RBP0.54□□□□□ -2.32
LRCH3-211ENST00000466054 POPDC3Q9HBV1 291 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 CITO14578 2027 aa0.54□□□□□ -2.32
LRCH3-211ENST00000466054 TRAV27A0A087WT01 109 aa0.53□□□□□ -2.32
LRCH3-211ENST00000466054 BANF1O75531 89 aa0.53□□□□□ -2.32
LRCH3-211ENST00000466054 IGLV1-51P01701 117 aa0.53□□□□□ -2.32
LRCH3-211ENST00000466054 CAPZBP47756 277 aa0.53□□□□□ -2.32
LRCH3-211ENST00000466054 CHMP6Q96FZ7 201 aa0.53□□□□□ -2.32
LRCH3-211ENST00000466054 ZC2HC1AQ96GY0 325 aa0.53□□□□□ -2.32
LRCH3-211ENST00000466054 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.33
LRCH3-211ENST00000466054 CRHP06850 196 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 ARPINQ7Z6K5 226 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 OR10AC1Q8NH08 325 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 CHCHD1Q96BP2 118 aaKnown RBP0.52□□□□□ -2.33
LRCH3-211ENST00000466054 GGACTQ9BVM4 153 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 MED29Q9NX70 200 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 HSPB8Q9UJY1 196 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 NCAPD3P42695 1498 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 CEP164Q9UPV0 1460 aa0.52□□□□□ -2.33
LRCH3-211ENST00000466054 MYO5AQ9Y4I1 1855 aaKnown RBP0.52□□□□□ -2.33
LRCH3-211ENST00000466054 G3V2T6 193 aa0.51□□□□□ -2.33
LRCH3-211ENST00000466054 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
LRCH3-211ENST00000466054 TRPM1Q7Z4N2 1603 aa0.51□□□□□ -2.33
LRCH3-211ENST00000466054 PXT1Q8NFP0 134 aa0.51□□□□□ -2.33
LRCH3-211ENST00000466054 HYLS1Q96M11 299 aa0.51□□□□□ -2.33
LRCH3-211ENST00000466054 PRNDQ9UKY0 176 aa0.51□□□□□ -2.33
LRCH3-211ENST00000466054 NUP210LQ5VU65 1888 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 UHRF1BP1Q6BDS2 1440 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 JMJD7-PLA2G4BH0Y9G9 81 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 H7C1C5 153 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 ATG12O94817 140 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 VBP1P61758 197 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 ARF6P62330 175 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 LCN6P62502 163 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 SPATA45Q537H7 98 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 SPINK9Q5DT21 86 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 AKR1C8PQ5T2L2 129 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 DHRS4L2Q6PKH6 230 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 IFT20Q8IY31 132 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 EXOC3-AS1Q8N2X6 119 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 OR4K15Q8NH41 348 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 ZNF714Q96N38 554 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 OR2J1Q9GZK6 312 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 CACYBPQ9HB71 228 aaKnown RBP0.5□□□□□ -2.33
LRCH3-211ENST00000466054 FREM3P0C091 2139 aa0.5□□□□□ -2.33
LRCH3-211ENST00000466054 TRAV5A0A0B4J249 113 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 K7EIL1 84 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms