RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CHTOPQ9Y3Y2 248 aaKnown RBP15.72■□□□□ 0.11
SDF4-205ENST00000465727 H3BTX0 84 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 K7EQM0 130 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 JKAMPQ9P055 326 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 A0A096LNJ9 63 aa15.71■□□□□ 0.11
SDF4-205ENST00000465727 RUSC1-AS1Q66K80 236 aa15.71■□□□□ 0.11
SDF4-205ENST00000465727 ZADH2Q8N4Q0 377 aa15.71■□□□□ 0.11
SDF4-205ENST00000465727 ZC2HC1AQ96GY0 325 aa15.71■□□□□ 0.11
SDF4-205ENST00000465727 RIPPLY3P57055 190 aa15.71■□□□□ 0.1
SDF4-205ENST00000465727 HCP5Q6MZN7 132 aa15.71■□□□□ 0.1
SDF4-205ENST00000465727 ADAMTSL5Q6ZMM2 481 aa15.71■□□□□ 0.1
SDF4-205ENST00000465727 LHFPL4Q7Z7J7 247 aa15.71■□□□□ 0.1
SDF4-205ENST00000465727 OR8A1Q8NGG7 326 aa15.71■□□□□ 0.1
SDF4-205ENST00000465727 U3KQK5 164 aa15.71■□□□□ 0.1
SDF4-205ENST00000465727 IFI27P40305 119 aaPredicted RBP15.7■□□□□ 0.1
SDF4-205ENST00000465727 MRGPRG-AS1Q2M3A8 158 aa15.7■□□□□ 0.1
SDF4-205ENST00000465727 PSMG4Q5JS54 123 aa15.7■□□□□ 0.1
SDF4-205ENST00000465727 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
SDF4-205ENST00000465727 SLC25A39Q9BZJ4 359 aaPredicted RBP15.7■□□□□ 0.1
SDF4-205ENST00000465727 ZNF785A8K8V0 405 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 CCL3L1P16619 93 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 TNFRSF1AP19438 455 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 HES3Q5TGS1 186 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 LYPD1Q8N2G4 141 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 A0A1W2PPM0 123 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 MBD3L4A6NDZ8 208 aaPredicted RBP15.69■□□□□ 0.1
SDF4-205ENST00000465727 MBD3L3A6NE82 208 aaPredicted RBP15.69■□□□□ 0.1
SDF4-205ENST00000465727 MBD3L5A6NJ08 208 aaPredicted RBP15.69■□□□□ 0.1
SDF4-205ENST00000465727 CIDEAO60543 219 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 S100A7P31151 101 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 RPL27AP46776 148 aaKnown RBP15.69■□□□□ 0.1
SDF4-205ENST00000465727 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 MBD3L2Q8NHZ7 208 aaPredicted RBP15.69■□□□□ 0.1
SDF4-205ENST00000465727 TPSG1Q9NRR2 321 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 SIGLEC8Q9NYZ4 499 aa15.69■□□□□ 0.1
SDF4-205ENST00000465727 CADP27708 2225 aa15.68■□□□□ 0.1
SDF4-205ENST00000465727 LPAL2Q16609 132 aa15.68■□□□□ 0.1
SDF4-205ENST00000465727 TMEM200BQ69YZ2 307 aa15.68■□□□□ 0.1
SDF4-205ENST00000465727 EXOC3-AS1Q8N2X6 119 aa15.68■□□□□ 0.1
SDF4-205ENST00000465727 THYN1Q9P016 225 aa15.68■□□□□ 0.1
SDF4-205ENST00000465727 KNTC1P50748 2209 aa15.68■□□□□ 0.1
SDF4-205ENST00000465727 TRAV17A0A0B4J275 112 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 HBDP02042 147 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 CT45A10P0DMU9 189 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 LYZP61626 148 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 NPFFR1Q9GZQ6 430 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 CACNG7P62955 275 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 DIAPH2-AS1Q14236 149 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 ORMDL3Q8N138 153 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 SPCS1Q9Y6A9 102 aa15.67■□□□□ 0.1
SDF4-205ENST00000465727 TRBV19A0A075B6N1 114 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 PSG3Q16557 428 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 PIFOQ8TCI5 191 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 ZNF414Q96IQ9 312 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 PRELID3AQ96N28 172 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 SCNM1Q9BWG6 230 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 PSG8Q9UQ74 426 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 F11RQ9Y624 299 aaKnown RBP15.66■□□□□ 0.1
SDF4-205ENST00000465727 DMDP11532 3685 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 D6R8Y8 96 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 RBPJQ06330 500 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 FAM104BQ5XKR9 115 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 IGFL2Q6UWQ7 119 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 NGBQ9NPG2 151 aa15.66■□□□□ 0.1
SDF4-205ENST00000465727 FAM106CPP0CH98 169 aa15.65■□□□□ 0.1
SDF4-205ENST00000465727 FABP2P12104 132 aa15.65■□□□□ 0.1
SDF4-205ENST00000465727 FAM106AQ4KMX7 169 aa15.65■□□□□ 0.1
SDF4-205ENST00000465727 HILPDAQ9Y5L2 63 aa15.65■□□□□ 0.1
SDF4-205ENST00000465727 KLK10O43240 276 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 LOXL1Q08397 574 aaPredicted RBP15.64■□□□□ 0.09
SDF4-205ENST00000465727 PRRC2CQ9Y520 2896 aaKnown RBP15.64■□□□□ 0.09
SDF4-205ENST00000465727 ARFGEF3Q5TH69 2177 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 PAX8Q06710 450 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 ZNF474Q6S9Z5 364 aaPredicted RBP15.64■□□□□ 0.09
SDF4-205ENST00000465727 SEM1Q6ZVN7 128 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 FDCSPQ8NFU4 85 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 IFI27L1Q96BM0 104 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 ABHD17AQ96GS6 310 aa15.64■□□□□ 0.09
SDF4-205ENST00000465727 K7EM74 188 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 THBDP07204 575 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 SIGLEC15Q6ZMC9 328 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 RASL11BQ9BPW5 248 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 INSIG2Q9Y5U4 225 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 CRIP1P50238 77 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 CCL11P51671 97 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 Q71RC1 249 aaPredicted RBP15.63■□□□□ 0.09
SDF4-205ENST00000465727 RITA1Q96K30 269 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 SHANK2-AS3Q9BTD1 123 aa15.63■□□□□ 0.09
SDF4-205ENST00000465727 LOC389332A0A1B0GUA5 103 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 SHISA9B4DS77 424 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 CRYGBP07316 175 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 CD59P13987 128 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 TPPP3Q9BW30 176 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 ARRDC1-AS1Q9H2J1 176 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 HIGD1BQ9P298 99 aa15.62■□□□□ 0.09
SDF4-205ENST00000465727 DSPP15924 2871 aaKnown RBP15.62■□□□□ 0.09
SDF4-205ENST00000465727 IGHV3-21A0A0B4J1V1 117 aa15.61■□□□□ 0.09
SDF4-205ENST00000465727 SERTM2A0A1B0GWG4 89 aa15.61■□□□□ 0.09
SDF4-205ENST00000465727 ENSAO43768 121 aaKnown RBP15.61■□□□□ 0.09
SDF4-205ENST00000465727 NUP37Q8NFH4 326 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 364.4 ms