RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
ALMS1-202ENST00000464408 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
ALMS1-202ENST00000464408 FLVCR2Q9UPI3 526 aa10.29□□□□□ -0.76
ALMS1-202ENST00000464408 PIGBOS1A0A0B4J2F0 54 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 H3BRN7 92 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 CRXO43186 299 aaPredicted RBP10.28□□□□□ -0.76
ALMS1-202ENST00000464408 MEOX2P50222 304 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
ALMS1-202ENST00000464408 RPP30P78346 268 aaKnown RBP10.28□□□□□ -0.76
ALMS1-202ENST00000464408 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 OR11H7Q8NGC8 314 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
ALMS1-202ENST00000464408 STRAPQ9Y3F4 350 aaKnown RBP10.28□□□□□ -0.76
ALMS1-202ENST00000464408 CCDC160A6NGH7 325 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
ALMS1-202ENST00000464408 SSSCA1O60232 199 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 CFDP00746 253 aaPredicted RBP10.27□□□□□ -0.77
ALMS1-202ENST00000464408 FGL1Q08830 312 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 BAK1Q16611 211 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 RRN3P1Q2M238 152 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 UBE2DNLQ8IWF7 75 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 IGF2BP2-AS1Q96M15 143 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 SLC25A39Q9BZJ4 359 aaPredicted RBP10.27□□□□□ -0.77
ALMS1-202ENST00000464408 SRRQ9GZT4 340 aa10.27□□□□□ -0.77
ALMS1-202ENST00000464408 RBM38Q9H0Z9 239 aaKnown RBP10.27□□□□□ -0.77
ALMS1-202ENST00000464408 S100A5P33763 92 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 RRAS2P62070 204 aaPredicted RBP10.26□□□□□ -0.77
ALMS1-202ENST00000464408 ID3Q02535 119 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 CYP2G1PQ6ZSU1 146 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 TMEM144Q7Z5S9 345 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 OR4D5Q8NGN0 318 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 UHRF2Q96PU4 802 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 PSENENQ9NZ42 101 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 MUC4Q99102 2169 aa10.26□□□□□ -0.77
ALMS1-202ENST00000464408 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 LINC00854A0A1B0GVQ3 168 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 IL5P05113 134 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 LINC00869P0C866 280 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 DAD1P61803 113 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 OXA1LQ15070 435 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 LGALS9BQ3B8N2 356 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 Q6ZR54 194 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 DEDD2Q8WXF8 326 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 GPR82Q96P67 336 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 HIGD1AQ9Y241 93 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 RYR1P21817 5038 aa10.25□□□□□ -0.77
ALMS1-202ENST00000464408 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 NDUFB6O95139 128 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 IFNA21P01568 189 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 METTL15P1P0C7V9 234 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 ANXA7P20073 488 aaKnown RBP10.24□□□□□ -0.77
ALMS1-202ENST00000464408 AZU1P20160 251 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 BTCP35070 178 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 UBE2MP61081 183 aaKnown RBP10.24□□□□□ -0.77
ALMS1-202ENST00000464408 FCN2Q15485 313 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 ZNF738Q8NE65 137 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 FAM210BQ96KR6 192 aa10.24□□□□□ -0.77
ALMS1-202ENST00000464408 SDHCQ99643 169 aaPredicted RBP10.24□□□□□ -0.77
ALMS1-202ENST00000464408 DUSP14O95147 198 aaKnown RBP10.23□□□□□ -0.77
ALMS1-202ENST00000464408 SCGB1D2O95969 90 aa10.23□□□□□ -0.77
ALMS1-202ENST00000464408 INSP01308 110 aa10.23□□□□□ -0.77
ALMS1-202ENST00000464408 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
ALMS1-202ENST00000464408 OR5G3P0C626 314 aa10.23□□□□□ -0.77
ALMS1-202ENST00000464408 OR4E1P0C645 316 aa10.23□□□□□ -0.77
ALMS1-202ENST00000464408 HIST1H1AQ02539 215 aaPredicted RBP10.23□□□□□ -0.77
ALMS1-202ENST00000464408 SLC38A11Q08AI6 406 aa10.23□□□□□ -0.77
ALMS1-202ENST00000464408 SMIM8Q96KF7 97 aa10.23□□□□□ -0.77
ALMS1-202ENST00000464408 BOLA2-SMG1P6H3BVE0 249 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 MRPS12O15235 138 aaKnown RBP10.22□□□□□ -0.77
ALMS1-202ENST00000464408 HYPMO75409 117 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 CXCL3P19876 107 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 PLP1P60201 277 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 RAP2BP61225 183 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 DLK1P80370 383 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 ARL16Q0P5N6 197 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 SPANXN2Q5MJ10 180 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 TMEM14EPQ6UXP3 125 aa10.22□□□□□ -0.77
ALMS1-202ENST00000464408 RCL1Q9Y2P8 373 aaKnown RBP10.22□□□□□ -0.77
ALMS1-202ENST00000464408 HSPG2P98160 4391 aa10.21□□□□□ -0.77
ALMS1-202ENST00000464408 A0A087X0K7 114 aa10.21□□□□□ -0.77
ALMS1-202ENST00000464408 RPL7P18124 248 aaKnown RBP10.21□□□□□ -0.77
ALMS1-202ENST00000464408 C4orf46Q504U0 113 aa10.21□□□□□ -0.77
ALMS1-202ENST00000464408 TRIQKQ629K1 86 aa10.21□□□□□ -0.77
ALMS1-202ENST00000464408 OR8A1Q8NGG7 326 aa10.21□□□□□ -0.77
ALMS1-202ENST00000464408 ARL6Q9H0F7 186 aa10.21□□□□□ -0.77
ALMS1-202ENST00000464408 NAP1L6A6NFF2 107 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms