RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 OTOGQ6ZRI0 2925 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 SH2D7A6NKC9 451 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-205ENST00000464187 ISLRO14498 428 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 IGKV1-17P01599 117 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 IGHV4-59P01825 116 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 AMY1AP04745 511 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
COL5A1-205ENST00000464187 IER3P46695 156 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 YPEL3P61236 119 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-205ENST00000464187 GNG5P63218 68 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 ASPHD1Q5U4P2 390 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 CDPF1Q6NVV7 123 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 TEX29Q8N6K0 151 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-205ENST00000464187 TRAV34A0A0B4J273 112 aa11.36□□□□□ -0.59
COL5A1-205ENST00000464187 FABP1P07148 127 aa11.36□□□□□ -0.59
COL5A1-205ENST00000464187 NBEAP1P0C6P0 100 aa11.36□□□□□ -0.59
COL5A1-205ENST00000464187 HIST1H1BP16401 226 aaKnown RBP11.36□□□□□ -0.59
COL5A1-205ENST00000464187 ADMP35318 185 aa11.36□□□□□ -0.59
COL5A1-205ENST00000464187 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
COL5A1-205ENST00000464187 OR8I2Q8N0Y5 310 aa11.36□□□□□ -0.59
COL5A1-205ENST00000464187 PACRGQ96M98 296 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-205ENST00000464187 FLNBO75369 2602 aaKnown RBP11.35□□□□□ -0.59
COL5A1-205ENST00000464187 AMBPP02760 352 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 SLC25A5P05141 298 aaKnown RBP11.35□□□□□ -0.59
COL5A1-205ENST00000464187 CBLN1P23435 193 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
COL5A1-205ENST00000464187 Q6YL49 198 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 OR1L6Q8NGR2 347 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 SLC25A39Q9BZJ4 359 aaPredicted RBP11.35□□□□□ -0.59
COL5A1-205ENST00000464187 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 EPDR1Q9UM22 224 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 MXRA5Q9NR99 2828 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
COL5A1-205ENST00000464187 EGR2P11161 476 aaPredicted RBP11.35□□□□□ -0.59
COL5A1-205ENST00000464187 PGPA6NDG6 321 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 H3BTX0 84 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 M0QZK8 103 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 ATP6V0E1O15342 81 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 FRMD6-AS1P0C7T7 363 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 RD3LP0DJH9 198 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 FANCD2OSQ96PS1 177 aa11.34□□□□□ -0.59
COL5A1-205ENST00000464187 MRPL27Q9P0M9 148 aaKnown RBP11.34□□□□□ -0.59
COL5A1-205ENST00000464187 SONP18583 2426 aaKnown RBP11.34□□□□□ -0.59
COL5A1-205ENST00000464187 IGLV11-55A0A075B6I3 123 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM183BQ1AE95 376 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 SMR3AQ99954 134 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 Q9H3A6 140 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
COL5A1-205ENST00000464187 SMIM27A0A1W2PRY6 76 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 TOMM40O96008 361 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 C5orf17Q8NAS9 161 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 MRPL18Q9H0U6 180 aaKnown RBP11.32□□□□□ -0.6
COL5A1-205ENST00000464187 RPH3ALQ9UNE2 315 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 S4R3C0 116 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 A0A1B0GUS0 222 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 H3BRN7 92 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 HOXA3O43365 443 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-205ENST00000464187 TCL1AP56279 114 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 UBE2G1P62253 170 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 BLCAPP62952 87 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 ECSCRQ19T08 205 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 C9orf152Q5JTZ5 239 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 ZNF586Q9NXT0 402 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 VPREB3Q9UKI3 123 aa11.32□□□□□ -0.6
COL5A1-205ENST00000464187 ZNF705GA8MUZ8 300 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-205ENST00000464187 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
COL5A1-205ENST00000464187 UNQ5815/PRO19632Q6UWF5 114 aa11.31□□□□□ -0.6
COL5A1-205ENST00000464187 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
COL5A1-205ENST00000464187 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
COL5A1-205ENST00000464187 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
COL5A1-205ENST00000464187 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 F8W735 103 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-205ENST00000464187 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-205ENST00000464187 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
COL5A1-205ENST00000464187 DNLZQ5SXM8 178 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 GBGT1Q8N5D6 347 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 ZNF491Q8N8L2 437 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 GNB1LQ9BYB4 327 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 G3V318 75 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 GATCO43716 136 aaKnown RBP11.3□□□□□ -0.6
COL5A1-205ENST00000464187 SPINK4O60575 86 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 IGHG2P01859 326 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 SLC35B1P78383 322 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms