RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 OR1B1Q8NGR6 318 aa15.89■□□□□ 0.13
USP4-208ENST00000464168 ATG101Q9BSB4 218 aa15.89■□□□□ 0.13
USP4-208ENST00000464168 CCDC59Q9P031 241 aaKnown RBP15.89■□□□□ 0.13
USP4-208ENST00000464168 MED6O75586 246 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 INSP01308 110 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 DEFB130BP0DP73 79 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 DEFB130AP0DP74 79 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 TSPOP30536 169 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 TMEM128Q5BJH2 165 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 TMED4Q7Z7H5 227 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 RNF182Q8N6D2 247 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 LRTM2Q8N967 370 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 BPIFCQ8NFQ6 507 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 ZNRF2Q8NHG8 242 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 GPR82Q96P67 336 aa15.88■□□□□ 0.13
USP4-208ENST00000464168 CIB3Q96Q77 187 aaPredicted RBP15.88■□□□□ 0.13
USP4-208ENST00000464168 NBDYA0A0U1RRE5 68 aa15.87■□□□□ 0.13
USP4-208ENST00000464168 PLAC8L1A1L4L8 177 aa15.87■□□□□ 0.13
USP4-208ENST00000464168 AZU1P20160 251 aa15.87■□□□□ 0.13
USP4-208ENST00000464168 FCN2Q15485 313 aa15.87■□□□□ 0.13
USP4-208ENST00000464168 BAP18Q8IXM2 172 aa15.87■□□□□ 0.13
USP4-208ENST00000464168 TMEM147Q9BVK8 224 aa15.87■□□□□ 0.13
USP4-208ENST00000464168 MRPS26Q9BYN8 205 aaKnown RBP15.87■□□□□ 0.13
USP4-208ENST00000464168 WRBO00258 174 aa15.86■□□□□ 0.13
USP4-208ENST00000464168 SYNGR2O43760 224 aa15.86■□□□□ 0.13
USP4-208ENST00000464168 TNFSF8P32971 234 aa15.86■□□□□ 0.13
USP4-208ENST00000464168 B2MP61769 119 aa15.86■□□□□ 0.13
USP4-208ENST00000464168 RPP30P78346 268 aaKnown RBP15.86■□□□□ 0.13
USP4-208ENST00000464168 TRAV12-2A0A075B6T6 113 aa15.85■□□□□ 0.13
USP4-208ENST00000464168 FABP12A6NFH5 140 aa15.85■□□□□ 0.13
USP4-208ENST00000464168 C16orf90A8MZG2 172 aa15.85■□□□□ 0.13
USP4-208ENST00000464168 F5H768 121 aa15.85■□□□□ 0.13
USP4-208ENST00000464168 SLC25A39Q9BZJ4 359 aaPredicted RBP15.85■□□□□ 0.13
USP4-208ENST00000464168 NUDT3O95989 172 aa15.84■□□□□ 0.13
USP4-208ENST00000464168 VAMP1P23763 118 aa15.84■□□□□ 0.13
USP4-208ENST00000464168 FGL1Q08830 312 aa15.84■□□□□ 0.13
USP4-208ENST00000464168 SPANXN5Q5MJ07 72 aa15.84■□□□□ 0.13
USP4-208ENST00000464168 C6orf223Q8N319 242 aa15.84■□□□□ 0.13
USP4-208ENST00000464168 RAB2BQ8WUD1 216 aa15.84■□□□□ 0.13
USP4-208ENST00000464168 H3BRN7 92 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 CDK2AP2O75956 126 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 S100A7P31151 101 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 AKR1C1Q04828 323 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 ACOT7LQ6ZUV0 252 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 ZNF738Q8NE65 137 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 SHANK2-AS3Q9BTD1 123 aa15.83■□□□□ 0.12
USP4-208ENST00000464168 SLIRPQ9GZT3 109 aaKnown RBP15.83■□□□□ 0.12
USP4-208ENST00000464168 CBY3A6NI87 242 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 BOLA2-SMG1P6H3BVE0 249 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 ATP5G1P05496 136 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 FAUP35544 74 aaKnown RBP15.82■□□□□ 0.12
USP4-208ENST00000464168 ATP5G3P48201 142 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 TMEM144Q7Z5S9 345 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 LINC01587Q99440 93 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 LINC00588Q9Y4M8 146 aa15.82■□□□□ 0.12
USP4-208ENST00000464168 H3BP45 60 aa15.81■□□□□ 0.12
USP4-208ENST00000464168 SFT2D2O95562 160 aa15.81■□□□□ 0.12
USP4-208ENST00000464168 TMBIM6P55061 237 aa15.81■□□□□ 0.12
USP4-208ENST00000464168 CCL18P55774 89 aa15.81■□□□□ 0.12
USP4-208ENST00000464168 TRIM63Q969Q1 353 aa15.81■□□□□ 0.12
USP4-208ENST00000464168 STRAPQ9Y3F4 350 aaKnown RBP15.81■□□□□ 0.12
USP4-208ENST00000464168 APOBP04114 4563 aaKnown RBP15.8■□□□□ 0.12
USP4-208ENST00000464168 HOXB5P09067 269 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 RPL7P18124 248 aaKnown RBP15.8■□□□□ 0.12
USP4-208ENST00000464168 TAS2R60P59551 318 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 PPP1R1AQ13522 171 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 CYP2G1PQ6ZSU1 146 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 TMEM256Q8N2U0 113 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 OR8A1Q8NGG7 326 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 BCL7BQ9BQE9 202 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 HIGD1AQ9Y241 93 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 DNAH5Q8TE73 4624 aa15.8■□□□□ 0.12
USP4-208ENST00000464168 HYPMO75409 117 aa15.79■□□□□ 0.12
USP4-208ENST00000464168 IL5P05113 134 aa15.79■□□□□ 0.12
USP4-208ENST00000464168 CXCL3P19876 107 aa15.79■□□□□ 0.12
USP4-208ENST00000464168 RHOBP62745 196 aa15.79■□□□□ 0.12
USP4-208ENST00000464168 HIST1H1AQ02539 215 aaPredicted RBP15.79■□□□□ 0.12
USP4-208ENST00000464168 RNF141Q8WVD5 230 aa15.79■□□□□ 0.12
USP4-208ENST00000464168 SLC25A21Q9BQT8 299 aaPredicted RBP15.79■□□□□ 0.12
USP4-208ENST00000464168 HTN1P15515 57 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 AP3S2P59780 193 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 PLP1P60201 277 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 RAP2BP61225 183 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 PSG3Q16557 428 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 TOMM5Q8N4H5 51 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 MAPKAPK5-AS1Q8N8E1 139 aa15.78■□□□□ 0.12
USP4-208ENST00000464168 TIMM8BQ9Y5J9 83 aaPredicted RBP15.78■□□□□ 0.12
USP4-208ENST00000464168 A0A087X0K7 114 aa15.77■□□□□ 0.12
USP4-208ENST00000464168 SMCO3A2RU48 225 aa15.77■□□□□ 0.12
USP4-208ENST00000464168 PRB4P10163 310 aaPredicted RBP15.77■□□□□ 0.12
USP4-208ENST00000464168 ID3Q02535 119 aa15.77■□□□□ 0.12
USP4-208ENST00000464168 C16orf74Q96GX8 76 aa15.77■□□□□ 0.12
USP4-208ENST00000464168 UHRF2Q96PU4 802 aa15.77■□□□□ 0.12
USP4-208ENST00000464168 PPP1R14DQ9NXH3 145 aa15.77■□□□□ 0.12
USP4-208ENST00000464168 OR5G3P0C626 314 aa15.76■□□□□ 0.11
USP4-208ENST00000464168 LINC00869P0C866 280 aa15.76■□□□□ 0.11
USP4-208ENST00000464168 PYDC2Q56P42 97 aa15.76■□□□□ 0.11
USP4-208ENST00000464168 SSX7Q7RTT5 188 aa15.76■□□□□ 0.11
USP4-208ENST00000464168 MCFD2Q8NI22 146 aa15.76■□□□□ 0.11
USP4-208ENST00000464168 PMS2P5A8MQ11 134 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms