RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 SELENOTP62341 195 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 POLR2GP62487 172 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 BAK1Q16611 211 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 TRIQKQ629K1 86 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 CYP2G1PQ6ZSU1 146 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 LINC00336Q6ZUF6 198 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 C7orf50Q9BRJ6 194 aaKnown RBP10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 SHANK2-AS3Q9BTD1 123 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 PSENENQ9NZ42 101 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 PMS2P5A8MQ11 134 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 FNDC10F2Z333 226 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 H3BRN7 92 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 HYPMO75409 117 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 IL5P05113 134 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 RAP2BP61225 183 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 RRN3P1Q2M238 152 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 CNPY1Q3B7I2 92 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 FAM222AQ5U5X8 452 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 GSG1LQ6UXU4 331 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 S100A7AQ86SG5 101 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 IGF2BP2-AS1Q96M15 143 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 SCRT1Q9BWW7 348 aa10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 SLC25A39Q9BZJ4 359 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-203ENST00000463988 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 LOC102723971A0A1B0GUV8 181 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 SMCO3A2RU48 225 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 CENPXA8MT69 81 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 K7EPK0 472 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 TAS2R30P59541 319 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 DLK1P80370 383 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 TMEM14EPQ6UXP3 125 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 FLVCR2Q9UPI3 526 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 RNF24Q9Y225 148 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 HIGD1AQ9Y241 93 aa10.23□□□□□ -0.77
SNRNP40-203ENST00000463988 SSSCA1O60232 199 aa10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 TSC22D2O75157 780 aa10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 CNN1P51911 297 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 B2MP61769 119 aa10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 C4orf46Q504U0 113 aa10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 SDHCQ99643 169 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 NPVFQ9HCQ7 196 aa10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-203ENST00000463988 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 A0A087X0K7 114 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 LINC00869P0C866 280 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 ANXA7P20073 488 aaKnown RBP10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 BTCP35070 178 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 IAH1Q2TAA2 248 aaPredicted RBP10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 PXDC1Q5TGL8 231 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 OR11H7Q8NGC8 314 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 OR10P1Q8NGE3 313 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 MITD1Q8WV92 249 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 TMEM208Q9BTX3 173 aa10.21□□□□□ -0.77
SNRNP40-203ENST00000463988 DNAH2Q9P225 4427 aa10.21□□□□□ -0.78
SNRNP40-203ENST00000463988 CRXO43186 299 aaPredicted RBP10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 INSP01308 110 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 OR5G3P0C626 314 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 METTL15P1P0C7V9 234 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 FGL1Q08830 312 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 LGALS9BQ3B8N2 356 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 IGFL4Q6B9Z1 124 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 TEPPQ6URK8 271 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 GGACTQ9BVM4 153 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 MGAT4CQ9UBM8 478 aa10.2□□□□□ -0.78
SNRNP40-203ENST00000463988 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 LINC00854A0A1B0GVQ3 168 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 CCNKO75909 580 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 CXCL3P19876 107 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 TSPOP30536 169 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 DAD1P61803 113 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 RRAS2P62070 204 aaPredicted RBP10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 SPINK13Q1W4C9 94 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 RNF212Q495C1 297 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 ZBTB8BQ8NAP8 495 aaPredicted RBP10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 ZNF738Q8NE65 137 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 UHRF2Q96PU4 802 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 RCL1Q9Y2P8 373 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-203ENST00000463988 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 LYRM9A8MSI8 78 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 M0R2Z0 102 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 SCGB1D2O95969 90 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 IL7P13232 177 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 CXCL2P19875 107 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 PSG3Q16557 428 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 PATE2Q6UY27 113 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 ZNF546Q86UE3 836 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 OR8A1Q8NGG7 326 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 ARL6Q9H0F7 186 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 ARV1Q9H2C2 271 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
SNRNP40-203ENST00000463988 C7orf66A4D0T2 115 aa10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 GOSR2O14653 212 aa10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 MBPP02686 304 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms