RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 C20orf24Q9BUV8 137 aa14.64□□□□□ -0.07
CCDC78-206ENST00000463539 CLPSL1A2RUU4 121 aa14.63□□□□□ -0.07
CCDC78-206ENST00000463539 GGTLC3B5MD39 225 aa14.63□□□□□ -0.07
CCDC78-206ENST00000463539 OR4F17Q8NGA8 305 aa14.63□□□□□ -0.07
CCDC78-206ENST00000463539 RPUSD4Q96CM3 377 aaKnown RBP14.63□□□□□ -0.07
CCDC78-206ENST00000463539 UBE2E2Q96LR5 201 aa14.63□□□□□ -0.07
CCDC78-206ENST00000463539 CUBNO60494 3623 aa14.62□□□□□ -0.07
CCDC78-206ENST00000463539 HIST1H1EP10412 219 aaKnown RBP14.62□□□□□ -0.07
CCDC78-206ENST00000463539 NIPSNAP3BQ9BS92 247 aa14.62□□□□□ -0.07
CCDC78-206ENST00000463539 NKX6-2Q9C056 277 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-206ENST00000463539 SNAPINO95295 136 aa14.62□□□□□ -0.07
CCDC78-206ENST00000463539 LGALS1P09382 135 aaKnown RBP14.62□□□□□ -0.07
CCDC78-206ENST00000463539 ZNF674Q2M3X9 581 aa14.62□□□□□ -0.07
CCDC78-206ENST00000463539 SCO2A0A1W2PP80 73 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 H3BQ15 152 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 IGLC2P0DOY2 106 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 RPL7P18124 248 aaKnown RBP14.61□□□□□ -0.07
CCDC78-206ENST00000463539 NF1P21359 2839 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 RANP62826 216 aaKnown RBP14.61□□□□□ -0.07
CCDC78-206ENST00000463539 SUMO1P63165 101 aaKnown RBP14.61□□□□□ -0.07
CCDC78-206ENST00000463539 OR8I2Q8N0Y5 310 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 SMIM7Q9BQ49 75 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 PARLQ9H300 379 aa14.61□□□□□ -0.07
CCDC78-206ENST00000463539 ZNF727A8MUV8 499 aa14.6□□□□□ -0.07
CCDC78-206ENST00000463539 H3BTX0 84 aa14.6□□□□□ -0.07
CCDC78-206ENST00000463539 MRPS12O15235 138 aaKnown RBP14.6□□□□□ -0.07
CCDC78-206ENST00000463539 ZNF207O43670 478 aaKnown RBP14.6□□□□□ -0.07
CCDC78-206ENST00000463539 NPPCP23582 126 aa14.6□□□□□ -0.07
CCDC78-206ENST00000463539 UNQ9165/PRO28630Q6UXU0 137 aa14.6□□□□□ -0.07
CCDC78-206ENST00000463539 C16orf95Q9H693 158 aa14.6□□□□□ -0.07
CCDC78-206ENST00000463539 ZNF586Q9NXT0 402 aa14.6□□□□□ -0.07
CCDC78-206ENST00000463539 BUB3O43684 328 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 NDUFB4O95168 129 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 CRYBB3P26998 211 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 FAM74A3Q4VXF1 159 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 ATRAIDQ6UW56 229 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 TMEM190Q8WZ59 177 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 ZNF320A2RRD8 509 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 SCO1O75880 301 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 CLRN3Q8NCR9 226 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 C11orf52Q96A22 123 aa14.59□□□□□ -0.07
CCDC78-206ENST00000463539 TRBV19A0A075B6N1 114 aa14.58□□□□□ -0.08
CCDC78-206ENST00000463539 M0R036 132 aa14.58□□□□□ -0.08
CCDC78-206ENST00000463539 TCF21O43680 179 aa14.58□□□□□ -0.08
CCDC78-206ENST00000463539 CRLF1O75462 422 aa14.58□□□□□ -0.08
CCDC78-206ENST00000463539 LINC01006Q8NI28 216 aa14.58□□□□□ -0.08
CCDC78-206ENST00000463539 ELOVL1Q9BW60 279 aa14.58□□□□□ -0.08
CCDC78-206ENST00000463539 CYSRT1A8MQ03 144 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 MYCNOSP40205 109 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 RPEL1Q2QD12 228 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 FAM106AQ4KMX7 169 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 TCTEX1D4Q5JR98 221 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 C1orf194Q5T5A4 169 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 TVP23CQ96ET8 276 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 DERL1Q9BUN8 251 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 U3KQE9 123 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 IGHV3OR16-13A0A075B7E8 117 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 IGHV3-49A0A0A0MS15 119 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 IGHV3-74A0A0B4J1X5 117 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 IGHV3-66A0A0C4DH42 116 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 APOHP02749 345 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-206ENST00000463539 CDX1P47902 265 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-206ENST00000463539 AWAT1Q58HT5 328 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 KHDC1LQ5JSQ8 128 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 GPHB5Q86YW7 130 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 WIPF2Q8TF74 440 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-206ENST00000463539 GPR82Q96P67 336 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 TCEAL7Q9BRU2 100 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 Q9H3A6 140 aa14.57□□□□□ -0.08
CCDC78-206ENST00000463539 FN1P02751 2386 aaKnown RBP14.56□□□□□ -0.08
CCDC78-206ENST00000463539 NDUFA7O95182 113 aa14.56□□□□□ -0.08
CCDC78-206ENST00000463539 ATF4P18848 351 aaPredicted RBP14.56□□□□□ -0.08
CCDC78-206ENST00000463539 PDE6HQ13956 83 aa14.56□□□□□ -0.08
CCDC78-206ENST00000463539 NAT8Q9UHE5 227 aa14.56□□□□□ -0.08
CCDC78-206ENST00000463539 PGPA6NDG6 321 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 C17orf77Q96MU5 243 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 DAZ1Q9NQZ3 744 aaKnown RBP14.55□□□□□ -0.08
CCDC78-206ENST00000463539 OTORQ9NRC9 128 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 IGHV4OR15-8A0A075B7B6 117 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 A0A087WW49 117 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 SLC25A5P05141 298 aaKnown RBP14.55□□□□□ -0.08
CCDC78-206ENST00000463539 GALR1P47211 349 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 PNRC1Q12796 327 aaPredicted RBP14.55□□□□□ -0.08
CCDC78-206ENST00000463539 TMEM241Q24JQ0 296 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 C4orf3Q8WVX3 66 aa14.55□□□□□ -0.08
CCDC78-206ENST00000463539 F8P00451 2351 aa14.54□□□□□ -0.08
CCDC78-206ENST00000463539 SLC17A3O00476 420 aa14.54□□□□□ -0.08
CCDC78-206ENST00000463539 LYPD1Q8N2G4 141 aa14.54□□□□□ -0.08
CCDC78-206ENST00000463539 C5orf17Q8NAS9 161 aa14.54□□□□□ -0.08
CCDC78-206ENST00000463539 SDF2L1Q9HCN8 221 aa14.54□□□□□ -0.08
CCDC78-206ENST00000463539 SMAD5-AS1Q9Y6J3 95 aa14.54□□□□□ -0.08
CCDC78-206ENST00000463539 PEX7O00628 323 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 RPL35P42766 123 aaKnown RBP14.53□□□□□ -0.08
CCDC78-206ENST00000463539 RHEBQ15382 184 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 SIGLEC15Q6ZMC9 328 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 C18orf65Q6ZTR6 163 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 EXOC3-AS1Q8N2X6 119 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 C2CD4CQ8TF44 421 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 HIST1H2BAQ96A08 127 aa14.53□□□□□ -0.08
CCDC78-206ENST00000463539 GRAMD2BQ96HH9 432 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms