RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TMEM231Q9H6L2 316 aa10.46□□□□□ -0.74
PHACTR4-203ENST00000463428 SMAD5-AS1Q9Y6J3 95 aa10.46□□□□□ -0.74
PHACTR4-203ENST00000463428 SORL1Q92673 2214 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 BMI1P35226 326 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 RHOBP62745 196 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 FAM122CQ6P4D5 195 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 DYNLRB2Q8TF09 96 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 PHYHIPLQ96FC7 376 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 GRAMD2BQ96HH9 432 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 SLC25A22Q9H936 323 aa10.45□□□□□ -0.74
PHACTR4-203ENST00000463428 UMAD1C9J7I0 102 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 AKR1C8PQ5T2L2 129 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 EIF5AL1Q6IS14 154 aaKnown RBP10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 SSX7Q7RTT5 188 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 TCF24Q7RTU0 167 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 TMEM61Q8N0U2 210 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 OR8I2Q8N0Y5 310 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 OR2K2Q8NGT1 345 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 ZNF503Q96F45 646 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 SLC25A2Q9BXI2 301 aa10.44□□□□□ -0.74
PHACTR4-203ENST00000463428 TRAV25A0A0B4J276 109 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 ZNF785A8K8V0 405 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 TSPAN4O14817 238 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 CD5P06127 495 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 FHITP49789 147 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 SULT1A2P50226 295 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 RAB24Q969Q5 203 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 GPR82Q96P67 336 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 RNF24Q9Y225 148 aa10.43□□□□□ -0.74
PHACTR4-203ENST00000463428 HELTA6NFD8 242 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 GP9P14770 177 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 RPL7P18124 248 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 ALKAL2Q6UX46 152 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 BPIFA4PQ86YQ2 179 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 GPR61Q9BZJ8 451 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 ACTR3CQ9C0K3 210 aaPredicted RBP10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 TMEM14CQ9P0S9 112 aa10.42□□□□□ -0.74
PHACTR4-203ENST00000463428 CTXND1A0A1B0GTU2 59 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 G3V4G9 280 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 IGLC2P0DOY2 106 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 FAM74A1Q5RGS3 127 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 DPPA3Q6W0C5 159 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 MGAM2Q2M2H8 2515 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 A0A087X0K7 114 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 H3BQ15 152 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 PYYP10082 97 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 GALR1P47211 349 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 RAB5CP51148 216 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 TAS2R45P59539 299 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 TEX261Q6UWH6 196 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 DCANP1Q8TF63 244 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 MBD3L1Q8WWY6 194 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 MS4A6AQ9H2W1 248 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 OR51M1Q9H341 326 aa10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 ZNF256Q9Y2P7 627 aaPredicted RBP10.41□□□□□ -0.74
PHACTR4-203ENST00000463428 IGKV3-7A0A075B6H7 116 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 SOCS3O14543 225 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 HIST1H1EP10412 219 aaKnown RBP10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 BEAN1Q3B7T3 259 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 KHDC3LQ587J8 217 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 LCN12Q6JVE5 192 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 GBGT1Q8N5D6 347 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 ZNF680Q8NEM1 530 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 FAM213BQ8TBF2 198 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 FXYD5Q96DB9 178 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 SPAG8Q99932 426 aaPredicted RBP10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 PAXXQ9BUH6 204 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 NRN1Q9NPD7 142 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 ZNF586Q9NXT0 402 aa10.4□□□□□ -0.75
PHACTR4-203ENST00000463428 K7EQG2 157 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 SNRPCP09234 159 aaKnown RBP10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 ARL14EPLP0DKL9 152 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 RPL11P62913 178 aaKnown RBP10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 PQLC2Q6ZP29 291 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 STXBP6Q8NFX7 210 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 SUN5Q8TC36 379 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 RNF141Q8WVD5 230 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
PHACTR4-203ENST00000463428 OR7C2O60412 319 aa10.38□□□□□ -0.75
PHACTR4-203ENST00000463428 NBEAP1P0C6P0 100 aa10.38□□□□□ -0.75
PHACTR4-203ENST00000463428 KRTAP10-11P60412 298 aa10.38□□□□□ -0.75
PHACTR4-203ENST00000463428 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
PHACTR4-203ENST00000463428 IFITM2Q01629 132 aa10.38□□□□□ -0.75
PHACTR4-203ENST00000463428 LCN15Q6UWW0 184 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms